Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU91059 | Sorghum | nucleus | 75.86 | 83.81 |
| Zm00001d033870_P001 | Maize | nucleus | 76.15 | 82.04 |
| TraesCS4D01G058900.1 | Wheat | nucleus | 62.36 | 68.67 |
| TraesCS4A01G255800.3 | Wheat | nucleus | 63.79 | 68.31 |
| HORVU4Hr1G009970.28 | Barley | nucleus | 63.22 | 68.11 |
| TraesCS4B01G059000.1 | Wheat | nucleus | 62.36 | 67.18 |
| Os03t0728900-00 | Rice | cytosol, nucleus | 50.86 | 65.56 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 23.85 | 36.73 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.29 | 31.1 |
| CDY31048 | Canola | nucleus | 25.0 | 27.71 |
| Bra031700.1-P | Field mustard | nucleus | 25.0 | 26.61 |
| CDY20659 | Canola | nucleus | 25.29 | 26.43 |
| Bra018461.1-P | Field mustard | nucleus | 24.14 | 26.09 |
| CDY22605 | Canola | nucleus | 26.15 | 25.78 |
| AT1G10120.1 | Thale cress | nucleus | 27.01 | 25.68 |
| CDY53834 | Canola | nucleus | 25.57 | 25.65 |
| Zm00001d034503_P002 | Maize | nucleus | 18.68 | 25.49 |
| CDY63738 | Canola | nucleus | 24.43 | 24.85 |
| Solyc04g077480.2.1 | Tomato | nucleus | 27.01 | 24.61 |
| Bra019962.1-P | Field mustard | nucleus | 23.85 | 24.48 |
| PGSC0003DMT400012591 | Potato | nucleus | 26.72 | 24.35 |
| Zm00001d006065_P002 | Maize | nucleus | 23.56 | 23.43 |
| Zm00001d021019_P001 | Maize | nucleus | 23.56 | 23.16 |
| Zm00001d007768_P001 | Maize | nucleus | 16.67 | 23.11 |
| Zm00001d031665_P001 | Maize | mitochondrion | 20.4 | 22.54 |
| Zm00001d051569_P001 | Maize | nucleus | 22.13 | 22.51 |
| KRH52141 | Soybean | nucleus | 19.25 | 22.41 |
| KRH61450 | Soybean | nucleus | 24.14 | 22.34 |
| Zm00001d006110_P002 | Maize | nucleus, plastid | 20.4 | 22.12 |
| VIT_18s0001g08600.t01 | Wine grape | nucleus | 27.3 | 22.09 |
| Zm00001d031561_P002 | Maize | nucleus | 24.71 | 21.99 |
| Zm00001d021086_P001 | Maize | nucleus, plastid | 17.82 | 21.6 |
| Zm00001d049870_P001 | Maize | nucleus | 19.54 | 21.32 |
| Zm00001d020826_P001 | Maize | nucleus | 26.15 | 20.97 |
| KRH15460 | Soybean | nucleus | 25.57 | 20.75 |
| CDY57925 | Canola | nucleus | 23.56 | 20.6 |
| Zm00001d005964_P002 | Maize | nucleus | 26.72 | 20.53 |
| KRG88634 | Soybean | nucleus, plastid | 25.57 | 20.46 |
| Zm00001d042373_P002 | Maize | nucleus | 27.01 | 20.3 |
| Zm00001d017778_P001 | Maize | nucleus | 22.13 | 20.05 |
| Zm00001d012067_P003 | Maize | nucleus | 27.01 | 19.58 |
| Zm00001d046759_P001 | Maize | plastid | 18.1 | 17.7 |
| Zm00001d036807_P001 | Maize | nucleus | 18.39 | 17.3 |
| Zm00001d007311_P001 | Maize | nucleus | 22.13 | 16.7 |
| Zm00001d049158_P001 | Maize | nucleus | 20.98 | 16.44 |
Protein Annotations
| EnsemblPlants:Zm00001d013357_P001 | EnsemblPlants:Zm00001d013357_T001 | EnsemblPlantsGene:Zm00001d013357 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF182 | PFAM:PF00010 | PFscan:PS50888 | ProteinID:AQK63171.1 | SUPFAM:SSF47459 |
| UniParc:UPI0008445096 | UniProt:A0A1D6GIA6 | MapMan:15.5.32 | : | : | : |
Description
bHLH-transcription factor 154Transcription factor bHLH62
Coordinates
chr5:+:9460784..9464006
Molecular Weight (calculated)
38133.2 Da
IEP (calculated)
6.421
GRAVY (calculated)
-0.434
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSGQQSDQG PSANSGREFS DANWNSFAVH QKMAYNGQYG FGSYGMGLED KLGLYPSSSG TLSQDIQMSE EHSGVVKKRK GVEDCVTLLH DAGDQQTKGS
101: PQPERNSVEE GNRKISPKMQ SKEDSSDGDG TKEDYVHIRA KRGQATNSHS LAERLRRKKI SERMKLLQDL VPGCSKVTSP LFVIATTSRG SVSASVAELF
201: WNICGILLVY IQYSNTVSSL QFLSMKLATV NPELGFDIEQ IISKQMLLSQ DRHLAFYGVE PGSSGLTGPF NQGIMQPELM CTIANPVDVL HGAIHDASTM
301: NHIPSMWEGL QNMPQMNFNP GVAADSGTNN SGIYMILSIL FPEKYKCP
101: PQPERNSVEE GNRKISPKMQ SKEDSSDGDG TKEDYVHIRA KRGQATNSHS LAERLRRKKI SERMKLLQDL VPGCSKVTSP LFVIATTSRG SVSASVAELF
201: WNICGILLVY IQYSNTVSSL QFLSMKLATV NPELGFDIEQ IISKQMLLSQ DRHLAFYGVE PGSSGLTGPF NQGIMQPELM CTIANPVDVL HGAIHDASTM
301: NHIPSMWEGL QNMPQMNFNP GVAADSGTNN SGIYMILSIL FPEKYKCP
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
Arabidopsis Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.