Factsheet for Zm00001d042373_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04098	Sorghum	nucleus	91.58	87.6
Os01t0915600-01	Rice	nucleus	84.23	81.08
Zm00001d012067_P003	Maize	nucleus	83.37	80.42
TraesCS3B01G457400.1	Wheat	nucleus	75.16	73.42
TraesCS3D01G417300.2	Wheat	nucleus	74.73	72.23
TraesCS3A01G421400.1	Wheat	nucleus	68.03	72.08
HORVU3Hr1G093310.2	Barley	nucleus, plasma membrane, plastid	74.95	54.56
Zm00001d007768_P001	Maize	nucleus	19.44	35.86
Solyc09g057710.2.1	Tomato	nucleus	35.64	34.81
Zm00001d034503_P002	Maize	nucleus	19.01	34.51
Zm00001d033870_P001	Maize	nucleus	23.97	34.37
PGSC0003DMT400053639	Potato	nucleus	36.5	34.35
Zm00001d021019_P001	Maize	nucleus	26.13	34.18
Zm00001d006065_P002	Maize	nucleus	25.7	34.0
Zm00001d007311_P001	Maize	nucleus	32.83	32.97
Zm00001d031561_P002	Maize	nucleus	27.65	32.74
Zm00001d049158_P001	Maize	nucleus	28.94	30.18
GSMUA_Achr10P...	Banana	nucleus	27.21	29.79
Zm00001d020826_P001	Maize	nucleus	27.86	29.72
Zm00001d021086_P001	Maize	nucleus, plastid	18.36	29.62
Zm00001d051569_P001	Maize	nucleus	21.81	29.53
GSMUA_Achr7P22770_001	Banana	nucleus	27.43	28.73
Zm00001d005964_P002	Maize	nucleus	27.21	27.81
Zm00001d017778_P001	Maize	nucleus	22.89	27.6
Zm00001d049870_P001	Maize	nucleus	18.79	27.27
Zm00001d013357_P001	Maize	nucleus	20.3	27.01
Zm00001d046759_P001	Maize	plastid	20.3	26.4
Zm00001d036807_P001	Maize	nucleus	20.52	25.68
Zm00001d006110_P002	Maize	nucleus, plastid	17.71	25.55
Zm00001d031665_P001	Maize	mitochondrion	17.28	25.4
GSMUA_Achr4P16120_001	Banana	nucleus	23.76	24.07
GSMUA_Achr7P02770_001	Banana	nucleus	24.84	23.57

Protein Annotations

EntrezGene:100382035	MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	UniProt:A0A1D6N3C4	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638
ProteinID:ONM35191.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF169	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI000844596E	EnsemblPlantsGene:Zm00001d042373	EnsemblPlants:Zm00001d042373_P002	EnsemblPlants:Zm00001d042373_T002	InterPro:bHLH_dom
SEG:seg	:	:	:	:	:

Description

bHLH-transcription factor 32Transcription factor bHLH62

Coordinates

chr3:+:163722133..163725150

Molecular Weight (calculated)

48898.3 Da

IEP (calculated)

6.570

GRAVY (calculated)

-0.634

Length

463 amino acids

Sequence
(BLAST)

001: MDCGPPDQLP PSSAPACFLN LNWDQSMAAA TAGDHLDLVS SPASNSTAAD GLALHGISPQ PQYGGTPLSS PRKLNLSMMG QFHHYPPMGH LDQFLADPGF
101: AARAARLSGF DGRPGGSGYG GAVPGQFGLP DAGPIGGALR ELELGNGRDE SSVSDPASAS AEMALKAPSD GNAKKRKASG KGKGKDGPGS TAATKEESSG
201: KRCKSAEESN GAEENSGKGK AAAQSNSDNG GKKQGKDGAS KPPEPPKDYI HVRARRGEAT DSHSLAERVR REKISQRMKL LQDLVPGCNK VVGKAVMLDE
301: IINYVQSLQR QVEFLSMKLA TVNPQLDFNN LPNLLPKDCD QMHQSCGPLQ NSHFPLETSG APLPYLNQGN PLIGCGLPNG MDNSQSSMHP LDPAFCRPMS
401: SQQHPFLNGV SDAASKVGTF WQDDLQSVVH MDMGQQSQQE MAPTSSNSYN DGSLQTVHMK MEL

Best Arabidopsis Sequence Match ( AT5G48560.1 )
(BLAST)

001: MDNELFMNTE FPPPPEMATH FEHQQSSSSA MMLNWALMDP NPHQDSSFLW EKSTEQQQQQ SIFDSALSSL VSSPTPSNSN FSGGGGDGFL IRELIGKLGN
101: IGNNNNNSGE IYGTPMSRSA SCYATPMSSP PPPTNSNSQM MMNRTTPLTE FSADPGFAER AARFSCFGSR SFNGRTNTNL PINNGNNMVN NSGKLTRVSS
201: TPALKALVSP EVTPGGEFSR KRKSVPKGKS KENPISTASP SPSFSKTAEK NGGKGGSKSS EEKGGKRRRE EEDDEEEEGE GEGNKSNNTK PPEPPKDYIH
301: VRARRGQATD SHSLAERVRR EKIGERMKLL QDLVPGCNKV TGKALMLDEI INYVQSLQRQ VEFLSMKLSS VNDTRLDFNV DALVSKDVMI PSSNNRLHEE
401: GLQSKSSSHH HQQQLNIYNN NSQLLPNISS NNMMLQSPMN SLETSTLARS FTHLPTLTQF TDSISQYQMF SEEDLQSIVG MGVAENPNNE SQHMKIEL

Arabidopsis Description

BHLH78Transcription factor bHLH78 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJL4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.