Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G457400.1 | Wheat | nucleus | 70.75 | 94.94 |
| TraesCS3D01G417300.2 | Wheat | nucleus | 70.75 | 93.95 |
| TraesCS3A01G421400.1 | Wheat | nucleus | 62.74 | 91.3 |
| Os01t0915600-01 | Rice | nucleus | 57.86 | 76.51 |
| Zm00001d042373_P002 | Maize | nucleus | 54.56 | 74.95 |
| EES04098 | Sorghum | nucleus | 56.92 | 74.79 |
| Zm00001d012067_P003 | Maize | nucleus | 53.46 | 70.83 |
| HORVU5Hr1G107520.2 | Barley | cytosol, nucleus | 13.05 | 40.1 |
| HORVU4Hr1G009970.28 | Barley | nucleus | 17.14 | 33.75 |
| PGSC0003DMT400053639 | Potato | nucleus | 25.0 | 32.32 |
| Solyc09g057710.2.1 | Tomato | nucleus | 23.9 | 32.07 |
| HORVU7Hr1G052870.23 | Barley | nucleus | 19.81 | 32.06 |
| HORVU7Hr1G055180.4 | Barley | nucleus, plastid | 14.78 | 31.97 |
| HORVU7Hr1G094690.1 | Barley | plastid | 11.16 | 28.74 |
| GSMUA_Achr10P... | Banana | nucleus | 18.87 | 28.37 |
| HORVU5Hr1G077390.1 | Barley | nucleus | 12.42 | 28.32 |
| HORVU6Hr1G068980.2 | Barley | nucleus | 16.98 | 27.98 |
| HORVU5Hr1G075430.5 | Barley | nucleus, plastid | 18.71 | 27.93 |
| GSMUA_Achr7P22770_001 | Banana | nucleus | 19.18 | 27.6 |
| GSMUA_Achr7P02770_001 | Banana | nucleus | 19.34 | 25.2 |
| HORVU0Hr1G020200.1 | Barley | nucleus | 17.3 | 25.0 |
| GSMUA_Achr4P16120_001 | Banana | nucleus | 17.92 | 24.95 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G093310.2 | EnsemblPlantsGene:HORVU3Hr1G093310 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF169 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000B467D9C | UniProt:A0A287MBI5 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : | : |
Description
No Description!
Coordinates
chrchr3H:-:641851932..641855001
Molecular Weight (calculated)
67195.4 Da
IEP (calculated)
7.595
GRAVY (calculated)
-0.426
Length
636 amino acids
Sequence
(BLAST)
(BLAST)
001: PIQFDPCHPG PISYTHTLPL PPTTLPPSLN LVSCFLPAVG AFRFGLGASF PLATFPPPSL SPPACGVTHT KSSCLFPYLS ATRSGIWWQL LASRASSLSS
101: LPSFLSCPLR HSPPVTAPHA RAAFFPSRWA RNSASSFAPG TVDWPRLLRA ADLLRNSGEG GLGEMNCGPP DQLPPATAGF LNLNWDSSMD AGGHPSPASN
201: SAAPTEGLAL HGISPRPQQH YGAGTPLGSP TKLNLSMMGQ YRHHAHQYPP PQVGGLPTLE NLMPMGSLDQ FLADPGFAQR AARLSGFDAR GGYGAQFGLP
301: DDGPVGALKE LELGSARDDS SVSDPASASA GAGMALKGAS DGNARKRKAA GGSKGKGKDA SVSTTSAKDL LAKEDSSSKR CKSMSMEDGE ENSGKGKAAQ
401: SSSENGGKKQ GKDGASKLPE PPKDFIHVRA RRGEATDSHS LAERVRREKI SQRMKLLQDL VPGCNKVVGK AVMLDEIINY VQSLQRQVEF LSMKLATVNP
501: QLDFNNLPNL LAKDMQQQSC GQLQQGSSHF PLEASGAALP YMGQGNNDHL GGCGMSDGGM GDDQGAMHPL DQAFCRPMGS QQQQQHFLSD AASQVGAFWQ
601: DLQSVVQMDM GQSQEIATSS NSYDGSLQTV HMKMEL
101: LPSFLSCPLR HSPPVTAPHA RAAFFPSRWA RNSASSFAPG TVDWPRLLRA ADLLRNSGEG GLGEMNCGPP DQLPPATAGF LNLNWDSSMD AGGHPSPASN
201: SAAPTEGLAL HGISPRPQQH YGAGTPLGSP TKLNLSMMGQ YRHHAHQYPP PQVGGLPTLE NLMPMGSLDQ FLADPGFAQR AARLSGFDAR GGYGAQFGLP
301: DDGPVGALKE LELGSARDDS SVSDPASASA GAGMALKGAS DGNARKRKAA GGSKGKGKDA SVSTTSAKDL LAKEDSSSKR CKSMSMEDGE ENSGKGKAAQ
401: SSSENGGKKQ GKDGASKLPE PPKDFIHVRA RRGEATDSHS LAERVRREKI SQRMKLLQDL VPGCNKVVGK AVMLDEIINY VQSLQRQVEF LSMKLATVNP
501: QLDFNNLPNL LAKDMQQQSC GQLQQGSSHF PLEASGAALP YMGQGNNDHL GGCGMSDGGM GDDQGAMHPL DQAFCRPMGS QQQQQHFLSD AASQVGAFWQ
601: DLQSVVQMDM GQSQEIATSS NSYDGSLQTV HMKMEL
001: MENELFMNAG VSHPPVMTSP SSSSAMLKWV SMETQPVDPS LSRNLFWEKS TEQSIFDSAL SSLVSSPTPS NSNFSVGGVG GENVIMRELI GKLGNIGDIY
101: GITASNGNSC YATPMSSPPP GSMMETKTTT PMAELSGDPG FAERAARFSC FGSRSFNSRT NSPFPINNEP PITTNEKMPR VSSSPVFKPL ASHVPAGESS
201: GELSRKRKTK SKQNSPSAVS SSKEIEEKED SDPKRCKKSE ENGDKTKSID PYKDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQDL VPGCNKVTGK
301: ALMLDEIINY VQSLQRQVEF LSMKLSSVNT RLDFNMDALL SKDIFPSSNN LMHHQQVLQL DSSAETLLGD HHNKNLQLNP DISSNNVINP LETSETRSFI
401: SHLPTLAHFT DSISQYSTFS EDDLHSIIHM GFAQNRLQEL NQGSSNQVPS HMKAEL
101: GITASNGNSC YATPMSSPPP GSMMETKTTT PMAELSGDPG FAERAARFSC FGSRSFNSRT NSPFPINNEP PITTNEKMPR VSSSPVFKPL ASHVPAGESS
201: GELSRKRKTK SKQNSPSAVS SSKEIEEKED SDPKRCKKSE ENGDKTKSID PYKDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQDL VPGCNKVTGK
301: ALMLDEIINY VQSLQRQVEF LSMKLSSVNT RLDFNMDALL SKDIFPSSNN LMHHQQVLQL DSSAETLLGD HHNKNLQLNP DISSNNVINP LETSETRSFI
401: SHLPTLAHFT DSISQYSTFS EDDLHSIIHM GFAQNRLQEL NQGSSNQVPS HMKAEL
Arabidopsis Description
BHLH62Transcription factor bHLH62 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRT2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.