Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G403900.1 | Wheat | cytosol | 60.32 | 96.75 |
| Os06t0613500-01 | Rice | cytosol, nucleus | 63.97 | 88.76 |
| TraesCS7B01G303300.1 | Wheat | nucleus | 81.78 | 64.33 |
| TraesCS7D01G397300.1 | Wheat | nucleus, plastid | 82.19 | 64.24 |
| Zm00001d046759_P001 | Maize | plastid | 69.23 | 48.03 |
| Zm00001d036807_P001 | Maize | nucleus | 70.04 | 46.76 |
| OQU76702 | Sorghum | nucleus | 70.45 | 42.44 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 22.27 | 39.86 |
| GSMUA_Achr4P19330_001 | Banana | nucleus | 49.8 | 31.78 |
| GSMUA_Achr7P06330_001 | Banana | nucleus | 46.15 | 31.15 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 45.75 | 30.96 |
| Bra003300.1-P | Field mustard | nucleus | 40.08 | 30.75 |
| CDX79883 | Canola | nucleus | 37.25 | 30.46 |
| CDX67710 | Canola | nucleus | 39.68 | 30.43 |
| HORVU5Hr1G107520.2 | Barley | cytosol, nucleus | 25.51 | 30.43 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 35.63 | 30.34 |
| Bra004679.1-P | Field mustard | nucleus | 36.84 | 30.13 |
| CDX98249 | Canola | nucleus | 34.01 | 30.0 |
| CDY53497 | Canola | nucleus | 37.25 | 29.77 |
| CDY06074 | Canola | nucleus | 42.51 | 29.49 |
| CDX88966 | Canola | nucleus | 39.27 | 29.22 |
| PGSC0003DMT400021130 | Potato | nucleus | 42.51 | 29.17 |
| VIT_08s0007g07870.t01 | Wine grape | nucleus | 42.91 | 29.12 |
| Bra007358.1-P | Field mustard | nucleus | 42.11 | 29.05 |
| Bra014603.1-P | Field mustard | nucleus | 40.49 | 28.9 |
| CDX71994 | Canola | nucleus | 42.11 | 28.81 |
| AT2G42300.1 | Thale cress | nucleus | 38.06 | 28.75 |
| KRH33022 | Soybean | nucleus | 41.3 | 28.57 |
| Solyc10g079070.1.1 | Tomato | nucleus | 41.7 | 28.53 |
| KRH71879 | Soybean | nucleus | 40.49 | 28.25 |
| KRG95332 | Soybean | nucleus | 40.89 | 27.6 |
| KRH67006 | Soybean | nucleus | 40.49 | 25.0 |
| AT3G57800.1 | Thale cress | nucleus | 42.51 | 24.65 |
| HORVU5Hr1G077390.1 | Barley | nucleus | 25.91 | 22.94 |
| HORVU7Hr1G055180.4 | Barley | nucleus, plastid | 26.32 | 22.11 |
| CDY47665 | Canola | cytosol | 21.86 | 21.01 |
| HORVU6Hr1G068980.2 | Barley | nucleus | 30.77 | 19.69 |
| HORVU4Hr1G009970.28 | Barley | nucleus | 25.1 | 19.2 |
| HORVU7Hr1G052870.23 | Barley | nucleus | 29.55 | 18.58 |
| HORVU5Hr1G075430.5 | Barley | nucleus, plastid | 28.74 | 16.67 |
| HORVU0Hr1G020200.1 | Barley | nucleus | 26.72 | 15.0 |
| HORVU3Hr1G093310.2 | Barley | nucleus, plasma membrane, plastid | 28.74 | 11.16 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G094690.1 | EnsemblPlantsGene:HORVU7Hr1G094690 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF112 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000B478568 | UniProt:A0A287XEH2 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : | : |
Description
No Description!
Coordinates
chrchr7H:+:576417857..576425036
Molecular Weight (calculated)
27399.6 Da
IEP (calculated)
11.570
GRAVY (calculated)
-0.777
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: SPPTRTSWTA PPASRPSRRR PLLPPPQPAS ARPTLPPRGR WRRRGRRRRA AARRRTPXXD EKPAYVHVRA RRGQATDSHS LAERARREKI NARMELLKEL
101: VPGCSKVSGT ALVLEEIINH VQSLQRQVEY LSMRLAAVNP RVDFGGLDNF LTAECGRITG LNCKSGMDLE QVSWPDMGVH GARNLAQLQQ QFWHGDLAQP
201: HQAASEWEKR GDVQPPVFSN TSSSLFGYDL ASSGPQQPPT SKLKTEL
101: VPGCSKVSGT ALVLEEIINH VQSLQRQVEY LSMRLAAVNP RVDFGGLDNF LTAECGRITG LNCKSGMDLE QVSWPDMGVH GARNLAQLQQ QFWHGDLAQP
201: HQAASEWEKR GDVQPPVFSN TSSSLFGYDL ASSGPQQPPT SKLKTEL
001: MDLTGGFGAR SGGVGPCREP IGLESLHLGD EFRQLVTTLP PENPGGSFTA LLELPPTQAV ELLHFTDSSS SQQAAVTGIG GEIPPPLHSF GGTLAFPSNS
101: VLMERAARFS VIATEQQNGN ISGETPTSSV PSNSSANLDR VKTEPAETDS SQRLISDSAI ENQIPCPNQN NRNGKRKDFE KKGKSSTKKN KSSEENEKLP
201: YVHVRARRGQ ATDSHSLAER ARREKINARM KLLQELVPGC DKIQGTALVL DEIINHVQSL QRQVEMLSMR LAAVNPRIDF NLDTILASEN GSLMDGSFNA
301: APMQLAWPQQ AIETEQSFHH RQLQQPPTQQ WPFDGLNQPV WGREEDQAHG NDNSNLMAVS ENVMVASANL HPNQVKMEL
101: VLMERAARFS VIATEQQNGN ISGETPTSSV PSNSSANLDR VKTEPAETDS SQRLISDSAI ENQIPCPNQN NRNGKRKDFE KKGKSSTKKN KSSEENEKLP
201: YVHVRARRGQ ATDSHSLAER ARREKINARM KLLQELVPGC DKIQGTALVL DEIINHVQSL QRQVEMLSMR LAAVNPRIDF NLDTILASEN GSLMDGSFNA
301: APMQLAWPQQ AIETEQSFHH RQLQQPPTQQ WPFDGLNQPV WGREEDQAHG NDNSNLMAVS ENVMVASANL HPNQVKMEL
Arabidopsis Description
BHLH60Transcription factor bHLH60 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAI1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.