Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0613500-01 | Rice | cytosol, nucleus | 87.66 | 75.84 |
| HORVU7Hr1G094690.1 | Barley | plastid | 96.75 | 60.32 |
| TraesCS7D01G397300.1 | Wheat | nucleus, plastid | 98.7 | 48.1 |
| TraesCS7B01G303300.1 | Wheat | nucleus | 96.75 | 47.45 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 35.71 | 39.86 |
| Zm00001d046759_P001 | Maize | plastid | 79.22 | 34.27 |
| Zm00001d036807_P001 | Maize | nucleus | 79.87 | 33.24 |
| OQU76702 | Sorghum | nucleus | 79.22 | 29.76 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 50.0 | 21.1 |
| GSMUA_Achr4P19330_001 | Banana | nucleus | 52.6 | 20.93 |
| GSMUA_Achr7P06330_001 | Banana | nucleus | 47.4 | 19.95 |
| CDX79883 | Canola | nucleus | 37.66 | 19.21 |
| VIT_08s0007g07870.t01 | Wine grape | nucleus | 44.81 | 18.96 |
| Bra003300.1-P | Field mustard | nucleus | 39.61 | 18.94 |
| Bra004679.1-P | Field mustard | nucleus | 37.01 | 18.87 |
| CDY06074 | Canola | nucleus | 43.51 | 18.82 |
| CDY53497 | Canola | nucleus | 37.66 | 18.77 |
| CDX67710 | Canola | nucleus | 38.96 | 18.63 |
| CDX71994 | Canola | nucleus | 43.51 | 18.56 |
| Bra014603.1-P | Field mustard | nucleus | 41.56 | 18.5 |
| Bra007358.1-P | Field mustard | nucleus | 42.86 | 18.44 |
| KRH71879 | Soybean | nucleus | 42.21 | 18.36 |
| PGSC0003DMT400021130 | Potato | nucleus | 42.86 | 18.33 |
| CDX88966 | Canola | nucleus | 38.96 | 18.07 |
| KRG95332 | Soybean | nucleus | 42.86 | 18.03 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 33.77 | 17.93 |
| KRH33022 | Soybean | nucleus | 41.56 | 17.93 |
| AT2G42300.1 | Thale cress | nucleus | 37.66 | 17.74 |
| Solyc10g079070.1.1 | Tomato | nucleus | 41.56 | 17.73 |
| CDX98249 | Canola | nucleus | 30.52 | 16.79 |
| KRH67006 | Soybean | nucleus | 42.21 | 16.25 |
| AT3G57800.1 | Thale cress | nucleus | 42.21 | 15.26 |
| TraesCS6A01G273000.2 | Wheat | nucleus | 32.47 | 13.85 |
| TraesCS5A01G292900.1 | Wheat | nucleus | 23.38 | 12.81 |
| TraesCS4A01G255800.3 | Wheat | nucleus | 26.62 | 12.62 |
| TraesCS7A01G263700.1 | Wheat | nucleus | 24.68 | 12.26 |
| TraesCS7A01G256200.3 | Wheat | nucleus | 29.87 | 11.59 |
| TraesCS5A01G250600.1 | Wheat | nucleus | 31.17 | 11.29 |
| TraesCS5A01G279200.2 | Wheat | nucleus | 27.27 | 10.88 |
| TraesCS3A01G421400.1 | Wheat | nucleus | 29.87 | 10.53 |
| TraesCS7A01G211900.1 | Wheat | nucleus | 25.97 | 9.09 |
| TraesCS2A01G275600.1 | Wheat | nucleus | 23.38 | 8.87 |
| CDY47665 | Canola | cytosol | 10.39 | 6.23 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G403900.1 | EnsemblPlantsGene:TraesCS7A01G403900 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF112 |
| PFscan:PS50888 | SUPFAM:SSF47459 | MapMan:15.5.32 | : | : | : |
Description
No Description!
Coordinates
chr7A:+:584388157..584394411
Molecular Weight (calculated)
16872.1 Da
IEP (calculated)
5.584
GRAVY (calculated)
-0.325
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MELLKELVPG CSKVSGTALV LEEIINHVQS LQRQVEYLSM RLAAVNPRVD FGGLDNLLTT ECGRITGLNC KSGMDLEQVS WPDMGVHGAR NLAQLQQQFW
101: HGDLAHPQQA ASPWEKRGDV QPPVFSNTSS SLFGYDLASS GPQQPPTSKL KTEL
101: HGDLAHPQQA ASPWEKRGDV QPPVFSNTSS SLFGYDLASS GPQQPPTSKL KTEL
001: MDLTQGFRAR SGVVGPVAGL ESLNFSDEFR HLVTTMPPET TGGSFTALLE MPVTQAMELL HFPDSSSSQA RTVTSGDISP TTLHPFGALT FPSNSLLLDR
101: AARFSVIATE QNGNFSGETA NSLPSNPGAN LDRVKAEPAE TDSMVENQNQ SYSSGKRKER EKKVKSSTKK NKSSVESDKL PYVHVRARRG QATDNHSLAE
201: RARREKINAR MKLLQELVPG CDKIQGTALV LDEIINHVQT LQRQVEMLSM RLAAVNPRID FNLDSILASE NGSLMDGSFN AESYHQLQQW PFDGYHQPEW
301: GREEDHHQAN FSMGSATLHP NQVKMEL
101: AARFSVIATE QNGNFSGETA NSLPSNPGAN LDRVKAEPAE TDSMVENQNQ SYSSGKRKER EKKVKSSTKK NKSSVESDKL PYVHVRARRG QATDNHSLAE
201: RARREKINAR MKLLQELVPG CDKIQGTALV LDEIINHVQT LQRQVEMLSM RLAAVNPRID FNLDSILASE NGSLMDGSFN AESYHQLQQW PFDGYHQPEW
301: GREEDHHQAN FSMGSATLHP NQVKMEL
Arabidopsis Description
BHLH48Transcription factor bHLH48 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ02]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.