Factsheet for TraesCS5A01G292900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G300100.1	Wheat	nucleus	94.66	96.38
TraesCS5B01G292100.1	Wheat	nucleus	93.95	95.65
HORVU5Hr1G077390.1	Barley	nucleus	94.31	94.98
Os09t0510500-01	Rice	nucleus	71.17	70.92
EER99171	Sorghum	nucleus	66.55	66.55
Zm00001d021086_P001	Maize	nucleus, plastid	64.77	63.41
Zm00001d006110_P002	Maize	nucleus, plastid	62.63	54.83
TraesCS7A01G263700.1	Wheat	nucleus	54.45	49.35
PGSC0003DMT400069568	Potato	nucleus	35.23	34.86
VIT_17s0000g00430.t01	Wine grape	nucleus	42.35	34.1
Solyc03g097820.1.1	Tomato	nucleus	39.86	33.94
PGSC0003DMT400051137	Potato	nucleus	40.57	33.73
KRH59766	Soybean	nucleus	40.21	33.04
KRH41084	Soybean	nucleus	39.15	32.45
CDY45806	Canola	nucleus	33.81	32.42
Bra022753.1-P	Field mustard	nucleus	34.16	32.32
CDX84885	Canola	nucleus	34.16	32.32
Solyc06g072520.1.1	Tomato	nucleus, plastid	33.1	32.18
AT5G50915.2	Thale cress	nucleus	32.74	32.17
KRH63842	Soybean	nucleus	39.15	31.79
KRH54121	Soybean	nucleus	39.15	31.52
VIT_01s0244g00010.t01	Wine grape	nucleus	28.11	29.26
GSMUA_Achr2P21460_001	Banana	nucleus	33.1	24.03
TraesCS6A01G273000.2	Wheat	nucleus	30.61	23.82
TraesCS7A01G403900.1	Wheat	cytosol	12.81	23.38
TraesCS4A01G255800.3	Wheat	nucleus	26.69	23.08
TraesCS7A01G256200.3	Wheat	nucleus	32.03	22.67
TraesCS5A01G279200.2	Wheat	nucleus	28.11	20.47
TraesCS2A01G275600.1	Wheat	nucleus	28.83	19.95
TraesCS5A01G250600.1	Wheat	nucleus	29.18	19.29
TraesCS3A01G421400.1	Wheat	nucleus	28.11	18.08
TraesCS7A01G211900.1	Wheat	nucleus	27.4	17.5

Protein Annotations

EnsemblPlants:TraesCS5A01G292900.1	EnsemblPlantsGene:TraesCS5A01G292900	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR12565
PANTHER:PTHR12565:SF88	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
TIGR:cd00083	MapMan:15.5.32	MapMan:26.1.2.1.2	:	:	:

Description

No Description!

Coordinates

chr5A:-:502786455..502787985

Molecular Weight (calculated)

30777.1 Da

IEP (calculated)

6.404

GRAVY (calculated)

-0.625

Length

281 amino acids

Sequence
(BLAST)

001: MAGFSHLPQQ MEYGLTNAGS FLLCHGNPED APAAAAASRE GSSVVLDTPL VATASVEKKR KPKEDTTSLN SAHSKETKES TRKRGGKKQG KEMDDDEEEP
101: KGYIHVRARR GQATDSHSLS ERVRRERISE RMRMLQSLVP GCDKVVTGKA LILDEIINYV QSLQNQVEFL SMRIASLSPV VYGFGMESEA AFSDQSQKIE
201: GMFHDAAALP TGPPMNRSSS PAPYQAMMDT GTSSSSPTYS LQGTQDNGSS SSSYMMQTVG EPRHELFNQV VFSNYMCSFQ Q

Best Arabidopsis Sequence Match ( AT5G50915.1 )
(BLAST)

001: MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQEEGEEREN FVDRSGFNNN NFCSFP

Arabidopsis Description

BHLH137Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.