Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G292100.1 | Wheat | nucleus | 98.55 | 98.55 |
| TraesCS5A01G292900.1 | Wheat | nucleus | 96.38 | 94.66 |
| HORVU5Hr1G077390.1 | Barley | nucleus | 95.29 | 94.27 |
| Os09t0510500-01 | Rice | nucleus | 72.83 | 71.28 |
| EER99171 | Sorghum | nucleus | 68.48 | 67.26 |
| Zm00001d021086_P001 | Maize | nucleus, plastid | 66.67 | 64.11 |
| Zm00001d006110_P002 | Maize | nucleus, plastid | 63.77 | 54.83 |
| TraesCS7D01G264600.3 | Wheat | nucleus | 61.59 | 50.75 |
| PGSC0003DMT400069568 | Potato | nucleus | 35.87 | 34.86 |
| Solyc03g097820.1.1 | Tomato | nucleus | 40.58 | 33.94 |
| VIT_17s0000g00430.t01 | Wine grape | nucleus | 42.75 | 33.81 |
| PGSC0003DMT400051137 | Potato | nucleus | 41.3 | 33.73 |
| KRH59766 | Soybean | nucleus | 40.58 | 32.75 |
| KRH41084 | Soybean | nucleus | 39.86 | 32.45 |
| CDY45806 | Canola | nucleus | 34.42 | 32.42 |
| Bra022753.1-P | Field mustard | nucleus | 34.78 | 32.32 |
| CDX84885 | Canola | nucleus | 34.78 | 32.32 |
| Solyc06g072520.1.1 | Tomato | nucleus, plastid | 33.7 | 32.18 |
| AT5G50915.2 | Thale cress | nucleus | 33.33 | 32.17 |
| KRH63842 | Soybean | nucleus | 40.22 | 32.08 |
| KRH54121 | Soybean | nucleus | 39.49 | 31.23 |
| VIT_01s0244g00010.t01 | Wine grape | nucleus | 28.62 | 29.26 |
| TraesCS5D01G459800.1 | Wheat | nucleus, plastid | 23.19 | 25.4 |
| GSMUA_Achr2P21460_001 | Banana | nucleus | 33.7 | 24.03 |
| TraesCS6D01G253000.1 | Wheat | nucleus | 30.8 | 24.01 |
| TraesCS4D01G058900.1 | Wheat | nucleus | 26.45 | 23.1 |
| TraesCS7D01G257000.2 | Wheat | nucleus | 32.25 | 23.0 |
| TraesCS7D01G397300.1 | Wheat | nucleus, plastid | 24.64 | 21.52 |
| TraesCS5D01G286300.5 | Wheat | nucleus | 28.62 | 21.07 |
| TraesCS2D01G274600.1 | Wheat | nucleus | 29.35 | 19.76 |
| TraesCS5D01G258300.1 | Wheat | nucleus | 29.71 | 19.34 |
| TraesCS7D01G213500.1 | Wheat | nucleus | 27.9 | 17.5 |
| TraesCS3D01G417300.2 | Wheat | nucleus | 28.62 | 16.49 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G300100.1 | EnsemblPlantsGene:TraesCS5D01G300100 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF88 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 |
| TIGR:cd00083 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : | : | : |
Description
No Description!
Coordinates
chr5D:-:397424901..397426448
Molecular Weight (calculated)
30130.4 Da
IEP (calculated)
6.403
GRAVY (calculated)
-0.632
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGFSHLPQQ MEYGLANAGS FLLCHGNPED AAASLEGSSG VLDTPLVATA SVEKKRKPKE DTASLNSAHS KETKESTRKR GGKKQGKEMD EEEEEPKGYI
101: HVRARRGQAT DSHSLSERVR RERISERMRM LQSLVPGCDK VTGKALILDE IINYVQSLQN QVEFLSMRIA SLSPVVYGFG MESGAAFSDQ SQKIEGMFHD
201: AAALPTGPPM NRSSSPAPSQ AMMDTGTSSS SPPYSLQGTQ DNGSSSSSYM MQTVGEPRHE LFNQVMFSNY MCSFQQ
101: HVRARRGQAT DSHSLSERVR RERISERMRM LQSLVPGCDK VTGKALILDE IINYVQSLQN QVEFLSMRIA SLSPVVYGFG MESGAAFSDQ SQKIEGMFHD
201: AAALPTGPPM NRSSSPAPSQ AMMDTGTSSS SPPYSLQGTQ DNGSSSSSYM MQTVGEPRHE LFNQVMFSNY MCSFQQ
001: MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQEEGEEREN FVDRSGFNNN NFCSFP
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQEEGEEREN FVDRSGFNNN NFCSFP
Arabidopsis Description
BHLH137Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.