Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G118800.1 | Wheat | nucleus | 97.95 | 97.95 |
| HORVU0Hr1G020200.1 | Barley | nucleus | 97.5 | 97.5 |
| TraesCS7A01G211900.1 | Wheat | nucleus | 97.27 | 97.27 |
| TraesCS5D01G459800.1 | Wheat | nucleus, plastid | 19.32 | 33.73 |
| TraesCS4D01G058900.1 | Wheat | nucleus | 22.95 | 31.96 |
| Os06t0275600-01 | Rice | cytosol, nucleus | 30.68 | 30.89 |
| Bra038336.1-P | Field mustard | plastid | 24.32 | 29.32 |
| TraesCS5D01G300100.1 | Wheat | nucleus | 17.5 | 27.9 |
| TraesCS5D01G258300.1 | Wheat | nucleus | 26.82 | 27.83 |
| VIT_01s0010g00740.t01 | Wine grape | nucleus | 29.09 | 27.29 |
| TraesCS5D01G286300.5 | Wheat | nucleus | 22.73 | 26.67 |
| TraesCS6D01G253000.1 | Wheat | nucleus | 21.36 | 26.55 |
| TraesCS7D01G397300.1 | Wheat | nucleus, plastid | 18.86 | 26.27 |
| TraesCS7D01G257000.2 | Wheat | nucleus | 22.95 | 26.1 |
| TraesCS7D01G264600.3 | Wheat | nucleus | 18.86 | 24.78 |
| Solyc05g010610.2.1 | Tomato | nucleus | 29.09 | 24.76 |
| CDY45835 | Canola | nucleus | 25.0 | 24.28 |
| PGSC0003DMT400050585 | Potato | nucleus | 28.64 | 24.23 |
| KRH71031 | Soybean | nucleus | 30.23 | 24.14 |
| Solyc01g010130.2.1 | Tomato | nucleus | 29.32 | 24.02 |
| KRH75189 | Soybean | nucleus | 30.0 | 24.0 |
| PGSC0003DMT400004830 | Potato | nucleus | 25.23 | 23.97 |
| Bra004348.1-P | Field mustard | nucleus | 25.91 | 23.95 |
| CDY33568 | Canola | nucleus | 26.14 | 23.86 |
| PGSC0003DMT400022704 | Potato | nucleus | 28.86 | 23.74 |
| CDX95974 | Canola | nucleus | 25.68 | 23.59 |
| AT1G68920.1 | Thale cress | nucleus | 25.91 | 23.46 |
| TraesCS3D01G417300.2 | Wheat | nucleus | 25.45 | 23.38 |
| CDX81575 | Canola | nucleus | 25.23 | 23.37 |
| TraesCS2D01G274600.1 | Wheat | nucleus | 21.36 | 22.93 |
| Solyc04g005220.1.1 | Tomato | nucleus | 18.86 | 19.81 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G213500.1 | EnsemblPlantsGene:TraesCS7D01G213500 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF182 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 |
| TIGR:cd00083 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : | : | : |
Description
No Description!
Coordinates
chr7D:+:172253418..172255690
Molecular Weight (calculated)
47606.3 Da
IEP (calculated)
5.881
GRAVY (calculated)
-0.733
Length
440 amino acids
Sequence
(BLAST)
(BLAST)
001: METNEKNAND LEEKNQPSGH SQQPSFHGPG FSLSPEPQMD SSSSALAAMG NPFPPGLWNP PGQNFGLGET NTNAMLNGHQ FSSFLGMLSA ATPAYPGAPS
101: GFMDCGTGFP GLSANSLGAM MDHPFSRNPP MGSFQNDIET SREMNVDEGC KDALLTGDRQ QGDTESSHGV DASSKDLSKP ECSGGAGQDE GPSVSCPKKR
201: KRPSQDRGVK HVQEGSQQLA TLAAKQEKDD DDKDEPKRPI GTSRKSNGKQ TEDKSDAPKE DYIHIRARSG QATNSHSLAE RVRREKISER MKFLQDLVPG
301: CSKVIGKAVM LDEIINYVQS LQRQVEFLSM KLSAVNPALD FNIERILSKD LFQSQGTASS TFGFLPDIGH QFLHPPKHSQ AALHSIVNPA DAFGRVTNAP
401: VGCTFKEATH QVSNNFDGEF HNVIGMPFTL FNDQESNGKP
101: GFMDCGTGFP GLSANSLGAM MDHPFSRNPP MGSFQNDIET SREMNVDEGC KDALLTGDRQ QGDTESSHGV DASSKDLSKP ECSGGAGQDE GPSVSCPKKR
201: KRPSQDRGVK HVQEGSQQLA TLAAKQEKDD DDKDEPKRPI GTSRKSNGKQ TEDKSDAPKE DYIHIRARSG QATNSHSLAE RVRREKISER MKFLQDLVPG
301: CSKVIGKAVM LDEIINYVQS LQRQVEFLSM KLSAVNPALD FNIERILSKD LFQSQGTASS TFGFLPDIGH QFLHPPKHSQ AALHSIVNPA DAFGRVTNAP
401: VGCTFKEATH QVSNNFDGEF HNVIGMPFTL FNDQESNGKP
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
Arabidopsis Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.