Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038336.1-P | Field mustard | plastid | 62.14 | 82.74 |
| CDX81575 | Canola | nucleus | 78.4 | 80.21 |
| CDY45835 | Canola | nucleus | 73.66 | 79.03 |
| VIT_01s0010g00740.t01 | Wine grape | nucleus | 45.88 | 47.55 |
| Solyc05g010610.2.1 | Tomato | nucleus | 45.88 | 43.13 |
| PGSC0003DMT400050585 | Potato | nucleus | 45.68 | 42.69 |
| KRH75189 | Soybean | nucleus | 48.15 | 42.55 |
| KRH71031 | Soybean | nucleus | 47.74 | 42.11 |
| PGSC0003DMT400022704 | Potato | nucleus | 44.86 | 40.75 |
| PGSC0003DMT400004830 | Potato | nucleus | 38.68 | 40.6 |
| AT1G26260.1 | Thale cress | nucleus | 32.1 | 40.0 |
| GSMUA_Achr6P36210_001 | Banana | nucleus | 22.63 | 40.0 |
| Solyc01g010130.2.1 | Tomato | nucleus | 43.83 | 39.66 |
| GSMUA_Achr8P24490_001 | Banana | nucleus | 31.69 | 37.2 |
| Os09t0474100-01 | Rice | nucleus | 32.51 | 36.92 |
| Os06t0275600-01 | Rice | cytosol, nucleus | 32.92 | 36.61 |
| TraesCS5D01G258300.1 | Wheat | nucleus | 31.69 | 36.32 |
| TraesCS5B01G248600.1 | Wheat | nucleus | 31.69 | 36.32 |
| TraesCS5A01G250600.1 | Wheat | nucleus | 31.69 | 36.24 |
| Zm00001d020826_P001 | Maize | nucleus | 32.3 | 36.18 |
| Solyc04g005220.1.1 | Tomato | nucleus | 31.07 | 36.04 |
| KXG35834 | Sorghum | nucleus | 32.3 | 35.93 |
| Zm00001d005964_P002 | Maize | nucleus | 31.28 | 33.55 |
| AT1G10120.1 | Thale cress | nucleus | 24.9 | 33.06 |
| AT5G50915.2 | Thale cress | nucleus | 19.14 | 32.52 |
| GSMUA_Achr9P18510_001 | Banana | nucleus | 20.78 | 32.37 |
| AT2G42300.1 | Thale cress | nucleus | 21.6 | 32.11 |
| GSMUA_Achr9P28060_001 | Banana | nucleus | 19.75 | 31.37 |
| AT4G34530.1 | Thale cress | nucleus | 21.4 | 31.04 |
| AT5G62610.2 | Thale cress | nucleus | 17.9 | 30.96 |
| AT3G23690.1 | Thale cress | nucleus | 23.46 | 30.73 |
| OQU81018 | Sorghum | nucleus | 23.66 | 30.67 |
| AT3G07340.1 | Thale cress | nucleus | 27.37 | 29.17 |
| GSMUA_Achr3P10600_001 | Banana | nucleus | 25.72 | 27.11 |
| HORVU0Hr1G020200.1 | Barley | nucleus | 23.66 | 26.14 |
| TraesCS7A01G211900.1 | Wheat | nucleus | 23.46 | 25.91 |
| TraesCS7D01G213500.1 | Wheat | nucleus | 23.46 | 25.91 |
| AT5G48560.1 | Thale cress | nucleus | 26.34 | 25.7 |
| AT3G57800.1 | Thale cress | nucleus | 22.43 | 25.59 |
| TraesCS7B01G118800.1 | Wheat | nucleus | 23.05 | 25.45 |
| AT1G59640.2 | Thale cress | nucleus | 17.9 | 25.36 |
| Os08t0487700-00 | Rice | nucleus | 17.7 | 25.07 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | EntrezGene:843225 | ProteinID:AAG51583.1 | ProteinID:AEE34861.1 |
| ProteinID:AEE34862.1 | ProteinID:AEE34863.1 | EMBL:AF488584 | ProteinID:ANM57902.1 | ArrayExpress:AT1G68920 | EnsemblPlantsGene:AT1G68920 |
| RefSeq:AT1G68920 | TAIR:AT1G68920 | RefSeq:AT1G68920-TAIR-G | EnsemblPlants:AT1G68920.1 | TAIR:AT1G68920.1 | EMBL:AY128299 |
| Unigene:At.28096 | EMBL:BT002259 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0040007 | GO:GO:0040008 | GO:GO:0043565 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | RefSeq:NP_001031255.1 | RefSeq:NP_001320380.1 | RefSeq:NP_177058.1 | RefSeq:NP_849863.2 |
| PFAM:PF00010 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | UniProt:Q9CAA9 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI00000AC550 | InterPro:bHLH_dom | SEG:seg | : | : |
Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
Coordinates
chr1:+:25914984..25918007
Molecular Weight (calculated)
52390.7 Da
IEP (calculated)
6.022
GRAVY (calculated)
-0.778
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQKNSEAAQ SHRSQQSEEE PDNNGDEKRN DEQSPNSPGK KSNSGKQQGK QSSDPPKDGY
301: IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPQMDFN LEGLLAKDAL QLRAGSSSTT
401: PFPPNMSMAY PPLPHGFMQQ TLSSIGRTIT SPLSPMNGGF KRQETNGWEG DLQNVIHINY GAGDVTPDPQ AAATASLPAA NMKVEP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQKNSEAAQ SHRSQQSEEE PDNNGDEKRN DEQSPNSPGK KSNSGKQQGK QSSDPPKDGY
301: IHVRARRGQA TNSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPQMDFN LEGLLAKDAL QLRAGSSSTT
401: PFPPNMSMAY PPLPHGFMQQ TLSSIGRTIT SPLSPMNGGF KRQETNGWEG DLQNVIHINY GAGDVTPDPQ AAATASLPAA NMKVEP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.