Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
cytosol:
18410482
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0193800-01 | Rice | endoplasmic reticulum | 19.22 | 40.38 |
| VIT_01s0010g00740.t01 | Wine grape | nucleus | 41.19 | 38.38 |
| Bra038336.1-P | Field mustard | plastid | 31.81 | 38.08 |
| Os03t0728900-00 | Rice | cytosol, nucleus | 22.88 | 37.04 |
| Os09t0474100-01 | Rice | nucleus | 35.47 | 36.22 |
| Os06t0613500-01 | Rice | cytosol, nucleus | 14.65 | 35.96 |
| Os04t0350700-01 | Rice | nucleus | 20.59 | 34.22 |
| KRH75189 | Soybean | nucleus | 42.79 | 34.0 |
| PGSC0003DMT400004830 | Potato | nucleus | 35.7 | 33.69 |
| PGSC0003DMT400050585 | Potato | nucleus | 40.05 | 33.65 |
| Solyc05g010610.2.1 | Tomato | nucleus | 39.13 | 33.08 |
| AT1G68920.1 | Thale cress | nucleus | 36.61 | 32.92 |
| CDY45835 | Canola | nucleus | 34.1 | 32.89 |
| CDX81575 | Canola | nucleus | 35.01 | 32.21 |
| CDY33568 | Canola | nucleus | 35.47 | 32.16 |
| KRH71031 | Soybean | nucleus | 40.5 | 32.12 |
| Os03t0802900-01 | Rice | nucleus | 19.45 | 32.08 |
| Bra004348.1-P | Field mustard | nucleus | 34.78 | 31.93 |
| CDX95974 | Canola | nucleus | 34.32 | 31.32 |
| Os09t0501600-01 | Rice | nucleus | 26.09 | 31.15 |
| Solyc01g010130.2.1 | Tomato | nucleus | 37.99 | 30.91 |
| TraesCS7A01G211900.1 | Wheat | nucleus | 31.12 | 30.91 |
| TraesCS7D01G213500.1 | Wheat | nucleus | 30.89 | 30.68 |
| HORVU0Hr1G020200.1 | Barley | nucleus | 30.89 | 30.68 |
| TraesCS7B01G118800.1 | Wheat | nucleus | 30.66 | 30.45 |
| PGSC0003DMT400022704 | Potato | nucleus | 36.84 | 30.09 |
| Solyc04g005220.1.1 | Tomato | nucleus | 28.6 | 29.83 |
| Os09t0510500-01 | Rice | nucleus | 19.22 | 29.79 |
| Os08t0524800-01 | Rice | nucleus | 27.46 | 29.63 |
| Os08t0536800-01 | Rice | cytosol, nucleus, plastid | 20.37 | 28.8 |
| Os05t0103000-01 | Rice | nucleus | 20.14 | 25.96 |
| Os08t0487700-00 | Rice | nucleus | 20.14 | 25.66 |
| Os11t0442500-00 | Rice | nucleus | 21.74 | 25.33 |
| Os02t0705500-01 | Rice | nucleus | 20.59 | 24.93 |
| Os01t0915600-01 | Rice | nucleus | 27.0 | 24.53 |
| Os09t0474051-01 | Rice | plastid | 12.59 | 9.4 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | EntrezGene:4340749 | ProteinID:BAD68029.1 | ProteinID:BAF19294.1 |
| ProteinID:BAS97228.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| EnsemblPlantsGene:Os06g0275600 | EnsemblPlants:Os06t0275600-01 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF182 |
| UniProt:Q5VR96 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0000457D39 | RefSeq:XP_015643533.1 | RefSeq:XP_015643534.1 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
basic helix-loop-helix protein 086, Transcriptional Activator protein 1Similar to TA1 protein (Fragment). (Os06t0275600-01);Hypothetical conserved gene. (Os06t0275600-02)
Coordinates
chr6:+:9364131..9367997
Molecular Weight (calculated)
47092.1 Da
IEP (calculated)
6.366
GRAVY (calculated)
-0.639
Length
437 amino acids
Sequence
(BLAST)
(BLAST)
001: MNEKDATDLE ERSEASEHGQ ALSFHGGAMF LQEAQIASPA AANNALTSMA NPFPIPPGLW NPPSHNMGLG ETSFSSLLGM LSAGAPPPFV ATPGFVDSTA
101: GFPCYNGGNL GAMINHPFPG IHQPLGDFQN GVEPCREIED IEIEGSKNVS QTGEKQQGDG ETTHAVDSSS KELSMPGRNG GAGHDEGTRV SCSKKRKRSG
201: QDGGVKHAEG GEQLATVGSA QKNEDDEKGE PKRSSVASGK SSGKQIKDNA GSPKEDYIHV RARRGQATNS HSLAERVRRE KISERMKYLQ DLVPGCSKVT
301: GKAVMLDEII NYVQSLQRQV EFLSMKLASV NPTLDFNIER ILSKDIFQCR GTTASSAFGF FPDIVHPRLH PPKYTQVGMP SIVNPTDAFG RVIHAPLGTN
401: SAFKEPKHQM PNNLNGEFQD VIEMPFTHDH HGSNDQP
101: GFPCYNGGNL GAMINHPFPG IHQPLGDFQN GVEPCREIED IEIEGSKNVS QTGEKQQGDG ETTHAVDSSS KELSMPGRNG GAGHDEGTRV SCSKKRKRSG
201: QDGGVKHAEG GEQLATVGSA QKNEDDEKGE PKRSSVASGK SSGKQIKDNA GSPKEDYIHV RARRGQATNS HSLAERVRRE KISERMKYLQ DLVPGCSKVT
301: GKAVMLDEII NYVQSLQRQV EFLSMKLASV NPTLDFNIER ILSKDIFQCR GTTASSAFGF FPDIVHPRLH PPKYTQVGMP SIVNPTDAFG RVIHAPLGTN
401: SAFKEPKHQM PNNLNGEFQD VIEMPFTHDH HGSNDQP
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
Arabidopsis Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.