Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- nucleus 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU89735 | Sorghum | nucleus | 67.49 | 70.17 |
| Zm00001d021019_P001 | Maize | nucleus | 67.49 | 69.77 |
| TraesCS5B01G278600.1 | Wheat | nucleus | 66.94 | 65.68 |
| TraesCS5D01G286300.5 | Wheat | nucleus | 67.21 | 65.6 |
| Zm00001d006065_P002 | Maize | nucleus | 62.57 | 65.43 |
| TraesCS5A01G279200.2 | Wheat | nucleus | 67.21 | 63.73 |
| HORVU5Hr1G075430.5 | Barley | nucleus, plastid | 66.12 | 56.81 |
| Os08t0524800-01 | Rice | nucleus | 62.3 | 56.3 |
| Os07t0193800-01 | Rice | endoplasmic reticulum | 22.13 | 38.94 |
| Os06t0613500-01 | Rice | cytosol, nucleus | 17.76 | 36.52 |
| Os04t0350700-01 | Rice | nucleus | 25.41 | 35.36 |
| Os03t0728900-00 | Rice | cytosol, nucleus | 25.14 | 34.07 |
| Os03t0802900-01 | Rice | nucleus | 24.04 | 33.21 |
| Os09t0510500-01 | Rice | nucleus | 23.22 | 30.14 |
| Os09t0474100-01 | Rice | nucleus | 33.06 | 28.27 |
| Os08t0536800-01 | Rice | cytosol, nucleus, plastid | 23.77 | 28.16 |
| Solyc09g057710.2.1 | Tomato | nucleus | 35.25 | 27.22 |
| Os05t0103000-01 | Rice | nucleus | 24.32 | 26.25 |
| Os06t0275600-01 | Rice | cytosol, nucleus | 31.15 | 26.09 |
| Os01t0915600-01 | Rice | nucleus | 34.15 | 25.99 |
| Os11t0442500-00 | Rice | nucleus | 26.5 | 25.87 |
| PGSC0003DMT400053639 | Potato | nucleus | 34.43 | 25.61 |
| Os02t0705500-01 | Rice | nucleus | 25.14 | 25.48 |
| GSMUA_Achr10P... | Banana | nucleus | 26.78 | 23.17 |
| Os08t0487700-00 | Rice | nucleus | 20.77 | 22.16 |
| GSMUA_Achr7P22770_001 | Banana | nucleus | 26.5 | 21.95 |
| GSMUA_Achr4P16120_001 | Banana | nucleus | 26.23 | 21.01 |
| GSMUA_Achr7P02770_001 | Banana | nucleus | 26.78 | 20.08 |
| Os09t0474051-01 | Rice | plastid | 13.93 | 8.72 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | EntrezGene:4347486 | EMBL:AK059036 | ProteinID:BAF25496.1 |
| ProteinID:BAT08816.1 | ProteinID:EAZ45263.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlantsGene:Os09g0501600 | EnsemblPlants:Os09t0501600-01 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF169 | UniProt:Q0J0S0 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0000DD97D9 | RefSeq:XP_015651378.1 | InterPro:bHLH_dom | SEG:seg | : | : |
Description
basic helix-loop-helix protein 092Similar to MYC1. (Os09t0501600-01)
Coordinates
chr9:-:19406212..19408388
Molecular Weight (calculated)
38502.9 Da
IEP (calculated)
4.828
GRAVY (calculated)
-0.425
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSDYVAGLL MSAAAAGLDL GVLDGGGGAF LETLCGGPGF AERAARLCGG GAGLFGLPAV GNAERGGCSR EGSSVSDPAW AHATGGGGDN ARKRKAPASA
101: AAGKDKDAVV GGGSSPCEVG EAKAPDSKKC KAEVNPKVEE AASDGSVGDR VQKQGKGKNS SKPAAEPPKD YVHVRARRGQ ATDSHSLAER VRREKISQRM
201: KVLQDLVPGC NKVVGKALML DEIINYVQSL QQQVEFLSMK LATVNPQLDF GNLSTLLQKD MFQSCGPSVN SVFPLESAGT AFPFCDQADF FQSFGLGAME
301: NQCSLDLANT ALPHTGSTQY AFQKQQRDLW EDNTFQYNDE QSQEDAVSAP NFDGQLQAAD HTEIEF
101: AAGKDKDAVV GGGSSPCEVG EAKAPDSKKC KAEVNPKVEE AASDGSVGDR VQKQGKGKNS SKPAAEPPKD YVHVRARRGQ ATDSHSLAER VRREKISQRM
201: KVLQDLVPGC NKVVGKALML DEIINYVQSL QQQVEFLSMK LATVNPQLDF GNLSTLLQKD MFQSCGPSVN SVFPLESAGT AFPFCDQADF FQSFGLGAME
301: NQCSLDLANT ALPHTGSTQY AFQKQQRDLW EDNTFQYNDE QSQEDAVSAP NFDGQLQAAD HTEIEF
001: MENELFMNAG VSHPPVMTSP SSSSAMLKWV SMETQPVDPS LSRNLFWEKS TEQSIFDSAL SSLVSSPTPS NSNFSVGGVG GENVIMRELI GKLGNIGDIY
101: GITASNGNSC YATPMSSPPP GSMMETKTTT PMAELSGDPG FAERAARFSC FGSRSFNSRT NSPFPINNEP PITTNEKMPR VSSSPVFKPL ASHVPAGESS
201: GELSRKRKTK SKQNSPSAVS SSKEIEEKED SDPKRCKKSE ENGDKTKSID PYKDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQDL VPGCNKVTGK
301: ALMLDEIINY VQSLQRQVEF LSMKLSSVNT RLDFNMDALL SKDIFPSSNN LMHHQQVLQL DSSAETLLGD HHNKNLQLNP DISSNNVINP LETSETRSFI
401: SHLPTLAHFT DSISQVSFSK TFFYHFSFLF LFNLKRS
101: GITASNGNSC YATPMSSPPP GSMMETKTTT PMAELSGDPG FAERAARFSC FGSRSFNSRT NSPFPINNEP PITTNEKMPR VSSSPVFKPL ASHVPAGESS
201: GELSRKRKTK SKQNSPSAVS SSKEIEEKED SDPKRCKKSE ENGDKTKSID PYKDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQDL VPGCNKVTGK
301: ALMLDEIINY VQSLQRQVEF LSMKLSSVNT RLDFNMDALL SKDIFPSSNN LMHHQQVLQL DSSAETLLGD HHNKNLQLNP DISSNNVINP LETSETRSFI
401: SHLPTLAHFT DSISQVSFSK TFFYHFSFLF LFNLKRS
Arabidopsis Description
BHLH62Transcription factor bHLH62 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRT2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.