Factsheet for Os11t0442500-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU83382	Sorghum	nucleus	53.87	46.98
Zm00001d007311_P001	Maize	nucleus	56.8	46.2
Zm00001d049158_P001	Maize	nucleus	53.07	44.82
Os07t0193800-01	Rice	endoplasmic reticulum	21.33	38.46
Os04t0350700-01	Rice	nucleus	25.87	36.88
Os03t0802900-01	Rice	nucleus	24.0	33.96
Os06t0613500-01	Rice	cytosol, nucleus	16.0	33.71
Os03t0728900-00	Rice	cytosol, nucleus	21.87	30.37
Os01t0915600-01	Rice	nucleus	37.6	29.31
Solyc09g057710.2.1	Tomato	nucleus	35.73	28.27
Os09t0510500-01	Rice	nucleus	20.8	27.66
PGSC0003DMT400053639	Potato	nucleus	36.27	27.64
Os08t0536800-01	Rice	cytosol, nucleus, plastid	22.13	26.86
Os09t0501600-01	Rice	nucleus	25.87	26.5
Os05t0103000-01	Rice	nucleus	22.93	25.37
Os08t0524800-01	Rice	nucleus	26.67	24.69
Os09t0474100-01	Rice	nucleus	27.47	24.07
GSMUA_Achr10P...	Banana	nucleus	26.67	23.64
GSMUA_Achr7P22770_001	Banana	nucleus	27.73	23.53
Os02t0705500-01	Rice	nucleus	22.13	22.99
Os06t0275600-01	Rice	cytosol, nucleus	25.33	21.74
Os08t0487700-00	Rice	nucleus	19.73	21.57
GSMUA_Achr4P16120_001	Banana	nucleus	25.6	21.01
GSMUA_Achr7P02770_001	Banana	nucleus	26.67	20.49
Os09t0474051-01	Rice	plastid	14.4	9.23

Protein Annotations

EnsemblPlants:Os11t0442500-00	EnsemblPlantsGene:Os11g0442500	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR12565
PANTHER:PTHR12565:SF184	PFAM:PF00010	PFscan:PS50888	ProteinID:BAT13872.1	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI000393A93E	UniProt:A0A0P0Y1V2	MapMan:15.5.32	MapMan:26.1.2.1.2	:

Description

Similar to BHLH transcription factor. (Os11t0442500-00)

Coordinates

chr11:-:14569673..14571090

Molecular Weight (calculated)

38411.8 Da

IEP (calculated)

8.746

GRAVY (calculated)

-0.225

Length

375 amino acids

Sequence
(BLAST)

001: MAHDGFLGGG GGSFHAMAAW PLPFDAAAAL HGGGWDSDPA LGELVPSPVG VGVGGGVHKA ALMDELASRL GGVCGGGLGG GGVPSPPSSS RYASCYSTPV
101: GSPCKPAPAP PVPSLLAAAD AMIAERAARM SCLAAAGHGG GKLSRAASSQ SLLAETAAAG GVHQLPASDG SSSDAPCRKR KAPCAKARGK DAATTIAKVL
201: RLLSAPPLQS RRRTSPETMV NFPQSPEPGT KAKKCKLSAD AAGDEDTKPV AGDAGHGGNG KGKVLDAAGE PPKDYIHVRA RRGQATDSHS LAERVRREKI
301: SERMKLLQDL VPGCNKVTGK AVMLDEIINY VQSLQRQVEF LSMKLSTVNP QLDFDVDNFI PKDVTIQPEF ALSFS

Best Arabidopsis Sequence Match ( AT5G48560.1 )
(BLAST)

001: MDNELFMNTE FPPPPEMATH FEHQQSSSSA MMLNWALMDP NPHQDSSFLW EKSTEQQQQQ SIFDSALSSL VSSPTPSNSN FSGGGGDGFL IRELIGKLGN
101: IGNNNNNSGE IYGTPMSRSA SCYATPMSSP PPPTNSNSQM MMNRTTPLTE FSADPGFAER AARFSCFGSR SFNGRTNTNL PINNGNNMVN NSGKLTRVSS
201: TPALKALVSP EVTPGGEFSR KRKSVPKGKS KENPISTASP SPSFSKTAEK NGGKGGSKSS EEKGGKRRRE EEDDEEEEGE GEGNKSNNTK PPEPPKDYIH
301: VRARRGQATD SHSLAERVRR EKIGERMKLL QDLVPGCNKV TGKALMLDEI INYVQSLQRQ VEFLSMKLSS VNDTRLDFNV DALVSKDVMI PSSNNRLHEE
401: GLQSKSSSHH HQQQLNIYNN NSQLLPNISS NNMMLQSPMN SLETSTLARS FTHLPTLTQF TDSISQYQMF SEEDLQSIVG MGVAENPNNE SQHMKIEL

Arabidopsis Description

BHLH78Transcription factor bHLH78 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJL4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.