Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU83382 | Sorghum | nucleus | 68.92 | 71.16 |
| Zm00001d007311_P001 | Maize | nucleus | 63.29 | 60.95 |
| Os11t0442500-00 | Rice | nucleus | 44.82 | 53.07 |
| Zm00001d007768_P001 | Maize | nucleus | 19.59 | 34.66 |
| Zm00001d034503_P002 | Maize | nucleus | 18.92 | 32.94 |
| Zm00001d021086_P001 | Maize | nucleus, plastid | 20.27 | 31.36 |
| Zm00001d031665_P001 | Maize | mitochondrion | 21.4 | 30.16 |
| Zm00001d033870_P001 | Maize | nucleus | 21.17 | 29.1 |
| Zm00001d042373_P002 | Maize | nucleus | 30.18 | 28.94 |
| Zm00001d006110_P002 | Maize | nucleus, plastid | 20.72 | 28.66 |
| Zm00001d049870_P001 | Maize | nucleus | 20.5 | 28.53 |
| Zm00001d006065_P002 | Maize | nucleus | 22.3 | 28.29 |
| Zm00001d021019_P001 | Maize | nucleus | 22.52 | 28.25 |
| Zm00001d012067_P003 | Maize | nucleus | 30.18 | 27.92 |
| Zm00001d051569_P001 | Maize | nucleus | 21.17 | 27.49 |
| PGSC0003DMT400053639 | Potato | nucleus | 29.95 | 27.03 |
| Zm00001d046759_P001 | Maize | plastid | 21.62 | 26.97 |
| Zm00001d031561_P002 | Maize | nucleus | 23.42 | 26.6 |
| Solyc09g057710.2.1 | Tomato | nucleus | 28.38 | 26.58 |
| Zm00001d036807_P001 | Maize | nucleus | 21.4 | 25.68 |
| Zm00001d020826_P001 | Maize | nucleus | 25.0 | 25.58 |
| Zm00001d005964_P002 | Maize | nucleus | 24.77 | 24.28 |
| Zm00001d017778_P001 | Maize | nucleus | 20.95 | 24.22 |
| GSMUA_Achr10P... | Banana | nucleus | 22.3 | 23.4 |
| GSMUA_Achr7P22770_001 | Banana | nucleus | 22.3 | 22.4 |
| GSMUA_Achr4P16120_001 | Banana | nucleus | 22.52 | 21.88 |
| Zm00001d013357_P001 | Maize | nucleus | 16.44 | 20.98 |
| GSMUA_Achr7P02770_001 | Banana | nucleus | 22.97 | 20.9 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | UniProt:A0A1D6PSU2 | ProteinID:AQK49741.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF182 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0008429CAE | EnsemblPlantsGene:Zm00001d049158 | EnsemblPlants:Zm00001d049158_P001 | EnsemblPlants:Zm00001d049158_T001 | InterPro:bHLH_dom | SEG:seg |
Description
bHLH-transcription factor 141Transcription factor bHLH62
Coordinates
chr4:+:18372576..18374628
Molecular Weight (calculated)
46090.4 Da
IEP (calculated)
7.778
GRAVY (calculated)
-0.367
Length
444 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHDGFLGGF HELSWPLVHA AAAGAAPFDP LLVHVPHALM GAGAGWQHEA AVGAIVPSQS QSQSPPPPPS SLAAAAVGGA DAVEAAMMEQ LASRLGVSVP
101: SPPSSRYVSC HSTPVAPCVL AGDAERAERL SCFPASGRKL SRVASSQSLL REQAPAPAPA PSPGAAAKQH AGDGACDGPC RKRKASGTSS KQSKAKEAVT
201: TAPPESRETA ETRAKKCKLS TDEERKPAAG EGWRGSGKGK ELVAADAEPP KDYIHVRARR GQATDSHSLA ERVRREKIGE RMKLLQDLVP GCSKVTGKAV
301: MLDEIINYVQ SLQRQVEFLS MKLSTVNPRL ELGADDSFVP RDDANKMCAA ATSSISMAQQ PLPLPAAYHA LEGSSPAFCY TTTPPAPGTA ARLGVAASDA
401: KAFEMAPPSS AATVNHAGTA ERRPLEGPAD ENASPQGEEV RNLP
101: SPPSSRYVSC HSTPVAPCVL AGDAERAERL SCFPASGRKL SRVASSQSLL REQAPAPAPA PSPGAAAKQH AGDGACDGPC RKRKASGTSS KQSKAKEAVT
201: TAPPESRETA ETRAKKCKLS TDEERKPAAG EGWRGSGKGK ELVAADAEPP KDYIHVRARR GQATDSHSLA ERVRREKIGE RMKLLQDLVP GCSKVTGKAV
301: MLDEIINYVQ SLQRQVEFLS MKLSTVNPRL ELGADDSFVP RDDANKMCAA ATSSISMAQQ PLPLPAAYHA LEGSSPAFCY TTTPPAPGTA ARLGVAASDA
401: KAFEMAPPSS AATVNHAGTA ERRPLEGPAD ENASPQGEEV RNLP
001: MENELFMNAG VSHPPVMTSP SSSSAMLKWV SMETQPVDPS LSRNLFWEKS TEQSIFDSAL SSLVSSPTPS NSNFSVGGVG GENVIMRELI GKLGNIGDIY
101: GITASNGNSC YATPMSSPPP GSMMETKTTT PMAELSGDPG FAERAARFSC FGSRSFNSRT NSPFPINNEP PITTNEKMPR VSSSPVFKPL ASHVPAGESS
201: GELSRKRKTK SKQNSPSAVS SSKEIEEKED SDPKRCKKSE ENGDKTKSID PYKDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQDL VPGCNKVTGK
301: ALMLDEIINY VQSLQRQVEF LSMKLSSVNT RLDFNMDALL SKDIFPSSNN LMHHQQVLQL DSSAETLLGD HHNKNLQLNP DISSNNVINP LETSETRSFI
401: SHLPTLAHFT DSISQYSTFS EDDLHSIIHM GFAQNRLQEL NQGSSNQVPS HMKAEL
101: GITASNGNSC YATPMSSPPP GSMMETKTTT PMAELSGDPG FAERAARFSC FGSRSFNSRT NSPFPINNEP PITTNEKMPR VSSSPVFKPL ASHVPAGESS
201: GELSRKRKTK SKQNSPSAVS SSKEIEEKED SDPKRCKKSE ENGDKTKSID PYKDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQDL VPGCNKVTGK
301: ALMLDEIINY VQSLQRQVEF LSMKLSSVNT RLDFNMDALL SKDIFPSSNN LMHHQQVLQL DSSAETLLGD HHNKNLQLNP DISSNNVINP LETSETRSFI
401: SHLPTLAHFT DSISQYSTFS EDDLHSIIHM GFAQNRLQEL NQGSSNQVPS HMKAEL
Arabidopsis Description
BHLH62Transcription factor bHLH62 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRT2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.