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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d045944_P007 nucleus

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G34530.1 Zm00001d045944_P007 AT1G04400.1 22739826
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES05656 Sorghum nucleus 83.59 89.42
Zm00001d051569_P001 Maize nucleus 74.74 83.92
Os02t0705500-01 Rice nucleus 62.5 66.48
TraesCS6B01G300400.1 Wheat nucleus 59.64 65.24
TraesCS6D01G253000.1 Wheat nucleus 59.64 64.69
TraesCS6A01G273000.2 Wheat nucleus 59.9 63.71
HORVU6Hr1G068980.2 Barley nucleus 62.76 62.44
GSMUA_Achr6P09050_001 Banana nucleus 32.03 38.92
CDX76288 Canola nucleus 23.18 35.6
GSMUA_Achr10P... Banana nucleus 35.68 34.08
Zm00001d007768_P001 Maize nucleus 21.88 33.47
Bra034636.1-P Field mustard nucleus 24.48 33.45
Solyc03g034000.2.1 Tomato nucleus 22.66 32.71
Zm00001d034503_P002 Maize nucleus 21.61 32.55
CDY17466 Canola nucleus 23.44 32.37
PGSC0003DMT400058169 Potato nucleus 22.4 32.09
Solyc02g062690.2.1 Tomato mitochondrion, nucleus 25.26 31.8
PGSC0003DMT400040021 Potato nucleus 24.74 31.35
CDX75440 Canola nucleus 26.3 30.7
Bra011540.1-P Field mustard nucleus 26.04 30.49
Zm00001d021086_P001 Maize nucleus, plastid 22.66 30.31
AT4G34530.1 Thale cress nucleus 26.3 30.15
Zm00001d031665_P001 Maize mitochondrion 23.96 29.21
CDX69067 Canola nucleus 25.52 28.82
Zm00001d033870_P001 Maize nucleus 23.96 28.48
Zm00001d049870_P001 Maize nucleus 23.44 28.21
KRH51523 Soybean nucleus 28.65 28.21
Zm00001d006110_P002 Maize nucleus, plastid 23.18 27.73
Zm00001d021019_P001 Maize nucleus 24.74 26.84
KRH29448 Soybean nucleus 29.17 26.6
KRH24463 Soybean nucleus 27.86 26.49
KRH60839 Soybean nucleus 29.17 26.05
Zm00001d031561_P002 Maize nucleus 26.3 25.83
Zm00001d006065_P002 Maize nucleus 23.44 25.71
Solyc01g109700.2.1 Tomato nucleus 28.65 25.35
VIT_03s0038g04760.t01 Wine grape nucleus 29.17 24.72
PGSC0003DMT400001888 Potato nucleus 28.12 24.43
VIT_04s0023g01930.t01 Wine grape nucleus 23.18 24.32
Zm00001d046759_P001 Maize plastid 21.61 23.31
Zm00001d042373_P002 Maize nucleus 27.6 22.89
Zm00001d020826_P001 Maize nucleus 25.78 22.81
Zm00001d005964_P002 Maize nucleus 26.56 22.52
Zm00001d012067_P003 Maize nucleus 28.12 22.5
Zm00001d036807_P001 Maize nucleus 21.61 22.43
Zm00001d013357_P001 Maize nucleus 20.05 22.13
Zm00001d007311_P001 Maize nucleus 25.52 21.26
Zm00001d049158_P001 Maize nucleus 24.22 20.95
Protein Annotations
MapMan:15.5.32MapMan:26.1.2.1.2Gene3D:4.10.280.10UniProt:A0A1D6HHL2ProteinID:AQK74022.1GO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0046983InterPro:HLH_DNA-bd_sfInterPro:IPR011598InterPro:IPR036638
PFAM:PF00010PFscan:PS50888PANTHER:PTHR12565PANTHER:PTHR12565:SF182SMART:SM00353SUPFAM:SSF47459
UniParc:UPI0008434F3FEnsemblPlantsGene:Zm00001d017778EnsemblPlants:Zm00001d017778_P001EnsemblPlants:Zm00001d017778_T001InterPro:bHLH_domSEG:seg
Description
bHLH-transcription factor 29Transcription factor bHLH63
Coordinates
chr5:-:206414473..206416485
Molecular Weight (calculated)
40093.9 Da
IEP (calculated)
8.155
GRAVY (calculated)
-0.207
Length
384 amino acids
Sequence
(BLAST)
001: MARCQGTVES LCQGLLDLDD DKFGAMCSAF GYLQEWPDLG AAMCGANLAV PPAVATPSAG DGNDSSSCSV SGGLRKRRPD AYLDAKGGAN GMNKRPRGKQ
101: QPSGLSEIAA APGKGKQERP KAGTKKKAEA AAAAAAAGQK TDYIHVRARR GQATDSHSLA ERVRRERISE RMRYLQELVP GCSKVTGKAG MLDEIINYVQ
201: SLQKQVEVPT HRHRPASSSP LLPASQLVIP RSLTAGSPCA QFLSMKIAAS NPVVSFDIVE DLFGRQLKQA CGPAAGQLEP SCLQMSMSPM QQVVHPSAAA
301: GSTGFGPLDM VLSNLYAPAA ASCPVSAAPS VSVAAGPSTI EPCLNVNGTA AAWDIGSQNL FSGFDAQFQS VESGCLLDNL KMEM
Best Arabidopsis Sequence Match ( AT4G34530.1 )
(BLAST)
001: MNGAIGGDLL LNFPDMSVLE RQRAHLKYLN PTFDSPLAGF FADSSMITGG EMDSYLSTAG LNLPMMYGET TVEGDSRLSI SPETTLGTGN FKKRKFDTET
101: KDCNEKKKKM TMNRDDLVEE GEEEKSKITE QNNGSTKSIK KMKHKAKKEE NNFSNDSSKV TKELEKTDYI HVRARRGQAT DSHSIAERVR REKISERMKF
201: LQDLVPGCDK ITGKAGMLDE IINYVQSLQR QIEFLSMKLA IVNPRPDFDM DDIFAKEVAS TPMTVVPSPE MVLSGYSHEM VHSGYSSEMV NSGYLHVNPM
301: QQVNTSSDPL SCFNNGEAPS MWDSHVQNLY GNLGV
Arabidopsis Description
BHLH63CIB1 [Source:UniProtKB/TrEMBL;Acc:A0A178V495]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.