Factsheet for Zm00001d021086_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 5
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99171	Sorghum	nucleus	85.71	87.54
Zm00001d006110_P002	Maize	nucleus, plastid	80.14	71.65
TraesCS5D01G300100.1	Wheat	nucleus	64.11	66.67
TraesCS5B01G292100.1	Wheat	nucleus	64.11	66.67
HORVU5Hr1G077390.1	Barley	nucleus	63.76	65.59
TraesCS5A01G292900.1	Wheat	nucleus	63.41	64.77
Os09t0510500-01	Rice	nucleus	63.07	64.18
Zm00001d031665_P001	Maize	mitochondrion	56.79	51.75
Zm00001d049870_P001	Maize	nucleus	51.22	46.08
PGSC0003DMT400069568	Potato	nucleus	35.19	35.56
Solyc06g072520.1.1	Tomato	nucleus, plastid	34.49	34.26
Solyc03g097820.1.1	Tomato	nucleus	39.37	34.24
VIT_17s0000g00430.t01	Wine grape	nucleus	41.46	34.1
PGSC0003DMT400051137	Potato	nucleus	39.72	33.73
CDY45806	Canola	nucleus	33.45	32.76
Bra022753.1-P	Field mustard	nucleus	33.8	32.66
CDX84885	Canola	nucleus	33.8	32.66
KRH63842	Soybean	nucleus	39.37	32.66
AT5G50915.2	Thale cress	nucleus	32.4	32.52
KRH41084	Soybean	nucleus	38.33	32.45
KRH54121	Soybean	nucleus	39.37	32.38
KRH59766	Soybean	nucleus	38.33	32.16
VIT_01s0244g00010.t01	Wine grape	nucleus	28.57	30.37
Zm00001d034503_P002	Maize	nucleus	24.74	27.84
Zm00001d007768_P001	Maize	nucleus	23.69	27.09
Zm00001d051569_P001	Maize	nucleus	31.36	26.32
GSMUA_Achr2P21460_001	Banana	nucleus	31.71	23.51
Zm00001d006065_P002	Maize	nucleus	27.87	22.86
Zm00001d017778_P001	Maize	nucleus	30.31	22.66
Zm00001d033870_P001	Maize	nucleus	25.44	22.6
Zm00001d021019_P001	Maize	nucleus	27.87	22.6
Zm00001d031561_P002	Maize	nucleus	29.27	21.48
Zm00001d049158_P001	Maize	nucleus	31.36	20.27
Zm00001d046759_P001	Maize	plastid	24.39	19.66
Zm00001d036807_P001	Maize	nucleus	24.04	18.65
Zm00001d020826_P001	Maize	nucleus	27.87	18.43
Zm00001d042373_P002	Maize	nucleus	29.62	18.36
Zm00001d012067_P003	Maize	nucleus	29.97	17.92
Zm00001d005964_P002	Maize	nucleus	28.22	17.88
Zm00001d013357_P001	Maize	nucleus	21.6	17.82
Zm00001d007311_P001	Maize	nucleus	28.22	17.57

Protein Annotations

MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EMBL:BT085581	UniProt:C4J434	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638
ProteinID:ONM56273.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF88	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0001A4C3E7	EnsemblPlantsGene:Zm00001d021086	EnsemblPlants:Zm00001d021086_P001	EnsemblPlants:Zm00001d021086_T001	InterPro:bHLH_dom
SEG:seg	:	:	:	:	:

Description

Transcription factor bHLH137

Coordinates

chr7:-:142451964..142454359

Molecular Weight (calculated)

31062.0 Da

IEP (calculated)

6.648

GRAVY (calculated)

-0.556

Length

287 amino acids

Sequence
(BLAST)

001: MASFPHLTQM EHGLASGASH GTPSFFFCHG TATADSASLE TSSGVLDTSP RGTSSDDNKA CRKHKEDSGA SFSSARSKDS NSKESSKRSG GKRDRSSKKV
101: DEEEPKGYIH VRARRGQATD NHSLAERVRR ERISERMRVL QALVPGCDKV TGKALILDEI INYVQSLQNQ VEFLSMRIAS LSPVLYGFGM DSSDAFSDLI
201: TQKIEGMAHH EAFAMPSSSV LNGTPSEALV DTHTSSSSPS YEVHGDGGTA SVSFPQDSGS YMVQTVGEPR QELFSQVVFS NHMCPFQ

Best Arabidopsis Sequence Match ( AT5G50915.1 )
(BLAST)

001: MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQEEGEEREN FVDRSGFNNN NFCSFP

Arabidopsis Description

BHLH137Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.