Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400069568 | Potato | nucleus | 88.58 | 90.14 |
| Solyc03g097820.1.1 | Tomato | nucleus | 63.32 | 55.45 |
| VIT_17s0000g00430.t01 | Wine grape | nucleus | 57.79 | 47.85 |
| Solyc03g113560.2.1 | Tomato | cytosol | 14.53 | 41.18 |
| KRH63842 | Soybean | nucleus | 49.13 | 41.04 |
| KRH54121 | Soybean | nucleus | 49.48 | 40.97 |
| KRH59766 | Soybean | nucleus | 48.44 | 40.94 |
| GSMUA_Achr5P24960_001 | Banana | nucleus | 25.61 | 40.22 |
| KRH41084 | Soybean | nucleus | 46.02 | 39.23 |
| EES14175 | Sorghum | nucleus | 37.37 | 36.86 |
| Os09t0510500-01 | Rice | nucleus | 34.95 | 35.82 |
| HORVU7Hr1G055180.4 | Barley | nucleus, plastid | 36.33 | 35.71 |
| EER99171 | Sorghum | nucleus | 34.26 | 35.23 |
| Zm00001d021086_P001 | Maize | nucleus, plastid | 34.26 | 34.49 |
| CDY45806 | Canola | nucleus | 34.6 | 34.13 |
| Os08t0536800-01 | Rice | cytosol, nucleus, plastid | 36.33 | 33.98 |
| TraesCS5D01G300100.1 | Wheat | nucleus | 32.18 | 33.7 |
| TraesCS5B01G292100.1 | Wheat | nucleus | 32.18 | 33.7 |
| Zm00001d031665_P001 | Maize | mitochondrion | 36.68 | 33.65 |
| Os05t0103000-01 | Rice | nucleus | 39.45 | 33.63 |
| Solyc04g005130.2.1 | Tomato | nucleus | 26.3 | 33.48 |
| Bra022753.1-P | Field mustard | nucleus | 34.26 | 33.33 |
| TraesCS5A01G292900.1 | Wheat | nucleus | 32.18 | 33.1 |
| CDX84885 | Canola | nucleus | 33.91 | 33.0 |
| HORVU5Hr1G077390.1 | Barley | nucleus | 31.83 | 32.97 |
| TraesCS7A01G263700.1 | Wheat | nucleus | 34.95 | 32.58 |
| AT5G50915.2 | Thale cress | nucleus | 31.83 | 32.17 |
| TraesCS7D01G264600.3 | Wheat | nucleus | 36.68 | 31.64 |
| TraesCS7B01G161700.3 | Wheat | nucleus, plastid | 36.68 | 31.64 |
| Zm00001d049870_P001 | Maize | nucleus | 34.26 | 31.03 |
| Zm00001d006110_P002 | Maize | nucleus, plastid | 34.26 | 30.84 |
| Solyc05g006650.2.1 | Tomato | nucleus | 26.99 | 28.68 |
| Solyc03g034000.2.1 | Tomato | nucleus | 26.3 | 28.57 |
| Solyc02g062690.2.1 | Tomato | mitochondrion, nucleus | 27.68 | 26.23 |
| Solyc04g077480.2.1 | Tomato | nucleus | 29.76 | 22.51 |
| Solyc09g097870.2.1 | Tomato | nucleus | 33.22 | 22.27 |
| Solyc10g079070.1.1 | Tomato | nucleus | 26.3 | 21.05 |
| Solyc12g098620.1.1 | Tomato | nucleus | 29.07 | 20.79 |
| Solyc01g109700.2.1 | Tomato | nucleus | 31.14 | 20.74 |
| Solyc09g057710.2.1 | Tomato | nucleus | 33.56 | 20.46 |
| Solyc06g083170.2.1 | Tomato | nucleus | 32.53 | 20.26 |
| Solyc05g010610.2.1 | Tomato | nucleus | 33.91 | 18.96 |
| Solyc01g010130.2.1 | Tomato | nucleus | 32.53 | 17.5 |
| Solyc04g005220.1.1 | Tomato | nucleus | 22.15 | 15.27 |
Protein Annotations
| EnsemblPlants:Solyc06g072520.1.1 | EnsemblPlantsGene:Solyc06g072520.1 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF184 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000276599F | UniProt:K4C8X2 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : | : |
Description
No Description!
Coordinates
chr6:+:44729547..44732261
Molecular Weight (calculated)
32476.2 Da
IEP (calculated)
7.416
GRAVY (calculated)
-0.686
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MEANSNSFHV DSVFHVPIKM SGFFEEPNNN ITSSSTLPNC VSQFYLQELS VNMSNNVHEI SHNEPSHVTN KTNSSSLCST QSKNVRDGDD GKGQKKRNGN
101: VKREKKTKEN KKKAPEEAPT GYVHVRARRG QATDSHSLAE RVRREKISER MKILQALVPG CDKVTGKALM LDEIINYVQS LQNQVEFLSM KLASLNPMYY
201: DFGMDLDALM VKPDQSWSGL EGPLLENTTS NYPHLDSSTS LMFQQLHLPN SVSQGSGHVL WSVDDQRQKM IINHSELISN NNNLSVPFH
101: VKREKKTKEN KKKAPEEAPT GYVHVRARRG QATDSHSLAE RVRREKISER MKILQALVPG CDKVTGKALM LDEIINYVQS LQNQVEFLSM KLASLNPMYY
201: DFGMDLDALM VKPDQSWSGL EGPLLENTTS NYPHLDSSTS LMFQQLHLPN SVSQGSGHVL WSVDDQRQKM IINHSELISN NNNLSVPFH
001: MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQVFHFFL
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQVFHFFL
Arabidopsis Description
BHLH137Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.