Factsheet for TraesCS7A01G263700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
mitochondrion 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G055180.4	Barley	nucleus, plastid	80.65	85.03
TraesCS7D01G264600.3	Wheat	nucleus	84.52	78.21
TraesCS7B01G161700.3	Wheat	nucleus, plastid	83.87	77.61
EES14175	Sorghum	nucleus	63.23	66.89
Zm00001d031665_P001	Maize	mitochondrion	60.97	60.0
Os08t0536800-01	Rice	cytosol, nucleus, plastid	59.35	59.55
Zm00001d049870_P001	Maize	nucleus	60.32	58.62
TraesCS5A01G292900.1	Wheat	nucleus	49.35	54.45
VIT_17s0000g00430.t01	Wine grape	nucleus	40.97	36.39
PGSC0003DMT400069568	Potato	nucleus	32.58	35.56
Solyc06g072520.1.1	Tomato	nucleus, plastid	32.58	34.95
Solyc03g097820.1.1	Tomato	nucleus	35.81	33.64
KRH41084	Soybean	nucleus	36.45	33.33
AT5G50915.2	Thale cress	nucleus	30.65	33.22
PGSC0003DMT400051137	Potato	nucleus	36.13	33.14
KRH59766	Soybean	nucleus	36.13	32.75
KRH63842	Soybean	nucleus	36.45	32.66
CDY45806	Canola	nucleus	30.65	32.42
Bra022753.1-P	Field mustard	nucleus	30.97	32.32
KRH54121	Soybean	nucleus	36.13	32.09
CDX84885	Canola	nucleus	30.65	31.99
VIT_01s0244g00010.t01	Wine grape	nucleus	27.42	31.48
TraesCS4A01G255800.3	Wheat	nucleus	27.1	25.85
GSMUA_Achr2P21460_001	Banana	nucleus	32.26	25.84
TraesCS6A01G273000.2	Wheat	nucleus	29.03	24.93
TraesCS7A01G403900.1	Wheat	cytosol	12.26	24.68
TraesCS7A01G256200.3	Wheat	nucleus	30.65	23.93
TraesCS5A01G279200.2	Wheat	nucleus	28.39	22.8
TraesCS2A01G275600.1	Wheat	nucleus	28.71	21.92
TraesCS3A01G421400.1	Wheat	nucleus	29.35	20.82
TraesCS5A01G250600.1	Wheat	nucleus	26.77	19.53
TraesCS7A01G211900.1	Wheat	nucleus	24.84	17.5

Protein Annotations

EnsemblPlants:TraesCS7A01G263700.1	EnsemblPlantsGene:TraesCS7A01G263700	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR12565
PANTHER:PTHR12565:SF302	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
TIGR:cd00083	MapMan:15.5.32	MapMan:26.1.2.1.2	:	:	:

Description

No Description!

Coordinates

chr7A:-:261879256..261881028

Molecular Weight (calculated)

33588.6 Da

IEP (calculated)

7.303

GRAVY (calculated)

-0.492

Length

310 amino acids

Sequence
(BLAST)

001: MADFSSTHHH SLLKMPAVFT TNDASTPNIS SFLLYNQTSH GQPPAPANAC AAMVEDASRE SSSAVLDNAS LQASASVDRK RKATDDSTTL SSAHSKDCKD
101: GKSRRKREKS STEQDQEEAP KGYIHVRARR GQATDSHSLA ERVRRERISE RMRLLQTLVP GCDKVTGKAL VLDEIINYVQ SLQNQVEFLS MRIASMSPVL
201: YGFGLDSDGL HDQAQKIGGM FQQEALAVPA PAASQAMMDT ASYSLQGQGG ISFSQSQSQW QLPDAISGRA KTGTAQSIGV QQHVLLPVGE EKEMKQPILT
301: IGAGIMLQDR

Best Arabidopsis Sequence Match ( AT5G50915.1 )
(BLAST)

001: MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQEEGEEREN FVDRSGFNNN NFCSFP

Arabidopsis Description

BHLH137Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.