CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031665_P001	Maize	mitochondrion	87.37	81.27
HORVU7Hr1G055180.4	Barley	nucleus, plastid	73.38	73.13
Os08t0536800-01	Rice	cytosol, nucleus, plastid	73.72	69.9
TraesCS7D01G264600.3	Wheat	nucleus	74.4	65.07
TraesCS7B01G161700.3	Wheat	nucleus, plastid	73.72	64.48
TraesCS7A01G263700.1	Wheat	nucleus	66.89	63.23
EER99171	Sorghum	nucleus	57.0	59.43
VIT_17s0000g00430.t01	Wine grape	nucleus	47.44	39.83
PGSC0003DMT400069568	Potato	nucleus	36.86	38.03
Solyc06g072520.1.1	Tomato	nucleus, plastid	36.86	37.37
PGSC0003DMT400051137	Potato	nucleus	41.98	36.39
Solyc03g097820.1.1	Tomato	nucleus	40.96	36.36
KRH63842	Soybean	nucleus	42.66	36.13
KRH41084	Soybean	nucleus	41.64	35.99
KRH59766	Soybean	nucleus	41.64	35.67
KRH54121	Soybean	nucleus	41.64	34.96
CDY45806	Canola	nucleus	34.81	34.81
Bra022753.1-P	Field mustard	nucleus	35.15	34.68
CDX84885	Canola	nucleus	34.81	34.34
AT5G50915.2	Thale cress	nucleus	33.11	33.92
VIT_01s0244g00010.t01	Wine grape	nucleus	29.69	32.22
EER90712	Sorghum	nucleus	25.94	30.04
GSMUA_Achr2P21460_001	Banana	nucleus	35.84	27.13
OQU91059	Sorghum	nucleus	28.67	26.67
EES05656	Sorghum	nucleus	31.74	25.91
OQU89735	Sorghum	nucleus	30.38	25.28
EES15330	Sorghum	nucleus	30.72	22.67
OQU83382	Sorghum	nucleus	33.11	22.56
OQU81018	Sorghum	nucleus	26.96	21.07
KXG35834	Sorghum	nucleus	30.03	20.14
EES04098	Sorghum	nucleus	29.01	17.56
OQU76702	Sorghum	nucleus	24.57	17.56

Protein Annotations

MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EntrezGene:8060932	UniProt:C5YHP2	EnsemblPlants:EES14175
ProteinID:EES14175	ProteinID:EES14175.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983
InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565
PANTHER:PTHR12565:SF302	SMART:SM00353	EnsemblPlantsGene:SORBI_3007G189400	SUPFAM:SSF47459	UniParc:UPI0001A87D36	RefSeq:XP_002444680.1
InterPro:bHLH_dom	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:62217236..62219372

Molecular Weight (calculated)

32047.6 Da

IEP (calculated)

5.914

GRAVY (calculated)

-0.595

Length

293 amino acids

Sequence
(BLAST)

001: MADFSQNDSL LLKMPSHSPN FSSLLFYGHN HGEAAAPANA NAMVEDASLE SSSAVVDTSP QDSASPMERK RKATEDSATL SSAQSKDCKQ QESKSKRGKR
101: PNKETEEKST TEDEATKGYI HVRARRGQAT DSHSLAERVR RERISERMRM LQALVPGCDK VTGKALILDE IINYVQSLQN QVEFLSMRIA SMSPVLYGFG
201: LDSDGLHDHA QKMGGMFQEA LAMPGPVLSQ ASPAPSQAIM DTTSTTPYSL QGQGSISFSQ ENGSTYLMQQ AVGEPTRQEL LNQLVFNNMC SFQ

Best Arabidopsis Sequence Match ( AT5G50915.3 )
(BLAST)

001: MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQVFHFFL

Arabidopsis Description

BHLH137Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.