Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d033870_P001 | Maize | nucleus | 93.02 | 90.71 |
| TraesCS4D01G058900.1 | Wheat | nucleus | 79.68 | 79.43 |
| TraesCS4B01G059000.1 | Wheat | nucleus | 80.0 | 78.02 |
| TraesCS4A01G255800.3 | Wheat | nucleus | 80.32 | 77.85 |
| Os03t0728900-00 | Rice | cytosol, nucleus | 66.35 | 77.41 |
| HORVU4Hr1G009970.28 | Barley | nucleus | 78.41 | 76.47 |
| Zm00001d013357_P001 | Maize | nucleus | 83.81 | 75.86 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 30.48 | 42.48 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.75 | 35.34 |
| CDY31048 | Canola | nucleus | 33.97 | 34.08 |
| Bra031700.1-P | Field mustard | nucleus | 34.29 | 33.03 |
| CDY20659 | Canola | nucleus | 34.6 | 32.73 |
| CDY22605 | Canola | nucleus | 36.51 | 32.58 |
| CDY53834 | Canola | nucleus | 35.87 | 32.56 |
| Bra018461.1-P | Field mustard | nucleus | 33.02 | 32.3 |
| AT1G10120.1 | Thale cress | nucleus | 36.83 | 31.69 |
| CDY63738 | Canola | nucleus | 34.29 | 31.58 |
| Bra019962.1-P | Field mustard | nucleus | 33.33 | 30.97 |
| EER90712 | Sorghum | nucleus | 24.13 | 30.04 |
| Solyc04g077480.2.1 | Tomato | nucleus | 35.87 | 29.58 |
| PGSC0003DMT400012591 | Potato | nucleus | 35.56 | 29.32 |
| EER99171 | Sorghum | nucleus | 26.03 | 29.18 |
| EES14175 | Sorghum | nucleus | 26.67 | 28.67 |
| KRH52141 | Soybean | nucleus | 26.67 | 28.09 |
| OQU81018 | Sorghum | nucleus | 33.02 | 27.73 |
| OQU89735 | Sorghum | nucleus | 30.79 | 27.56 |
| KRH61450 | Soybean | nucleus | 32.7 | 27.39 |
| CDY57925 | Canola | nucleus | 33.65 | 26.63 |
| VIT_18s0001g08600.t01 | Wine grape | nucleus | 36.19 | 26.51 |
| EES05656 | Sorghum | nucleus | 30.16 | 26.46 |
| EES15330 | Sorghum | nucleus | 33.02 | 26.2 |
| KRH15460 | Soybean | nucleus | 34.6 | 25.41 |
| KRG88634 | Soybean | nucleus, plastid | 34.92 | 25.29 |
| KXG35834 | Sorghum | nucleus | 34.6 | 24.94 |
| EES04098 | Sorghum | nucleus | 35.56 | 23.14 |
| OQU83382 | Sorghum | nucleus | 31.43 | 23.02 |
| OQU76702 | Sorghum | nucleus | 23.49 | 18.05 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | EntrezGene:8059961 | UniProt:C5WM06 | ProteinID:EER90943.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009637 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:OQU91059 | ProteinID:OQU91059 | ProteinID:OQU91059.1 | ProteinID:OQU91060.1 |
| ProteinID:OQU91061.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF182 | SMART:SM00353 |
| EnsemblPlantsGene:SORBI_3001G105000 | SUPFAM:SSF47459 | UniParc:UPI0001A82404 | RefSeq:XP_002463945.1 | InterPro:bHLH_dom | : |
Description
hypothetical protein
Coordinates
chr1:+:8043729..8047586
Molecular Weight (calculated)
34955.2 Da
IEP (calculated)
6.316
GRAVY (calculated)
-0.756
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSGQQSDQG PSANSGREFP KANWNSFTMH QKMAYSGQYG FGSYGIGLED RPGLYQSSSG TLSQDIQMSD EHSGGVKKRK GMEDRVTLLH NAGDQQTEGS
101: SQPERNSMEE GNRKISPKMQ SKEDSSDGDG TKEDYVHVRA KRGQATNSHS LAERLRRKKI SERMKLLQDL VPGCNKITGK AVMLDEIINY VQSLQRQVEF
201: LSMKLATVNP ELGFDIEQII SKQMMLSQDR HLAFYGVDPG SSSLTAPFNQ GIMQPEMMCN ISNPVDVLHG TIHDLSTMNQ IPSMWEGVQN MPQMNFNPVA
301: ADSGTNNSGS MKIEQ
101: SQPERNSMEE GNRKISPKMQ SKEDSSDGDG TKEDYVHVRA KRGQATNSHS LAERLRRKKI SERMKLLQDL VPGCNKITGK AVMLDEIINY VQSLQRQVEF
201: LSMKLATVNP ELGFDIEQII SKQMMLSQDR HLAFYGVDPG SSSLTAPFNQ GIMQPEMMCN ISNPVDVLHG TIHDLSTMNQ IPSMWEGVQN MPQMNFNPVA
301: ADSGTNNSGS MKIEQ
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
Arabidopsis Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.