Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g077480.2.1 | Tomato | nucleus | 53.02 | 59.69 |
| PGSC0003DMT400012591 | Potato | nucleus | 52.33 | 58.9 |
| KRH15460 | Soybean | nucleus | 57.44 | 57.58 |
| KRG88634 | Soybean | nucleus, plastid | 57.67 | 57.01 |
| KRH52141 | Soybean | nucleus | 38.14 | 54.85 |
| CDY31048 | Canola | nucleus | 39.53 | 54.14 |
| KRH61450 | Soybean | nucleus | 46.05 | 52.66 |
| Bra018461.1-P | Field mustard | nucleus | 38.6 | 51.55 |
| CDY20659 | Canola | nucleus | 39.77 | 51.35 |
| Bra031700.1-P | Field mustard | nucleus | 38.37 | 50.46 |
| CDY53834 | Canola | nucleus | 40.0 | 49.57 |
| Bra019962.1-P | Field mustard | nucleus | 38.84 | 49.26 |
| AT1G10120.1 | Thale cress | nucleus | 41.63 | 48.91 |
| CDY63738 | Canola | nucleus | 38.84 | 48.83 |
| CDY22605 | Canola | nucleus | 40.0 | 48.73 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 23.72 | 45.13 |
| CDY57925 | Canola | nucleus | 39.07 | 42.21 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.05 | 39.58 |
| Os03t0728900-00 | Rice | cytosol, nucleus | 24.42 | 38.89 |
| OQU91059 | Sorghum | nucleus | 26.51 | 36.19 |
| TraesCS4D01G058900.1 | Wheat | nucleus | 26.05 | 35.44 |
| VIT_07s0151g00450.t01 | Wine grape | nucleus | 33.95 | 35.18 |
| Zm00001d033870_P001 | Maize | nucleus | 26.05 | 34.67 |
| VIT_01s0026g01140.t01 | Wine grape | nucleus | 22.33 | 34.66 |
| TraesCS4A01G255800.3 | Wheat | nucleus | 26.05 | 34.46 |
| TraesCS4B01G059000.1 | Wheat | nucleus | 25.81 | 34.37 |
| HORVU4Hr1G009970.28 | Barley | nucleus | 25.58 | 34.06 |
| VIT_01s0244g00010.t01 | Wine grape | nucleus | 21.16 | 33.7 |
| VIT_01s0010g00740.t01 | Wine grape | nucleus | 36.74 | 33.69 |
| VIT_17s0000g05370.t01 | Wine grape | nucleus | 21.63 | 32.75 |
| VIT_17s0000g00430.t01 | Wine grape | nucleus | 25.35 | 31.23 |
| VIT_03s0038g04760.t01 | Wine grape | nucleus | 29.07 | 27.59 |
| Zm00001d013357_P001 | Maize | nucleus | 22.09 | 27.3 |
| VIT_04s0023g01930.t01 | Wine grape | nucleus | 23.02 | 27.05 |
| VIT_08s0007g07870.t01 | Wine grape | nucleus | 22.09 | 26.1 |
| VIT_05s0029g00390.t01 | Wine grape | nucleus | 31.63 | 25.0 |
Protein Annotations
| EntrezGene:100247194 | wikigene:100247194 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | EMBL:AM430199 |
| ProteinID:CAN60403 | ProteinID:CAN60403.1 | ProteinID:CBI19359 | ProteinID:CBI19359.3 | UniProt:E0CNY1 | EMBL:FN595227 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | EntrezGene:LOC100247194 | wikigene:LOC100247194 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF184 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00019853FB | ArrayExpress:VIT_18s0001g08600 | EnsemblPlantsGene:VIT_18s0001g08600 |
| EnsemblPlants:VIT_18s0001g08600.t01 | unigene:Vvi.16744 | RefSeq:XP_002285475 | RefSeq:XP_002285475.1 | RefSeq:XP_019072099.1 | InterPro:bHLH_dom |
Description
No Description!
Coordinates
chr18:-:7033471..7036494
Molecular Weight (calculated)
46344.3 Da
IEP (calculated)
6.355
GRAVY (calculated)
-0.637
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIDDNGNMG FPNTSQSILN CPSSGMNTHP ISEKVTGMTM SSASMYKSSN GGDPFFGSGW DPIVSLSQNE NFGGSSMVSH SEFANSAYPV VLENQGIGST
101: PHLVLYPSNS SLVEMVPKLP CFGSGSFSEM VASFGLPECG QTANSGCPPN FPPNKEGLTE KSLNGAQSQE GHQISEGDAV DASPSGKRRK SSFDPRPPLN
201: TSKSADGEQP KGLPWENSEF SKEQEEKKLK IDQNMSPNLR GKQPNKHAKD NSSNGEAPKE NYIHVRARRG QATNSHSLAE RVRREKISER MRLLQELVPG
301: CNKITGKAVM LDEIINYVQS LQQQVEFLSM KLATVNPELN IDIERLLSKD ILNSRGGSTS VLGFGPGMSS SHPYPHGISQ GTLPGIPTPQ FHSTQAVWDG
401: ELQSLLQMGF DSNPSSNNLG TNAGRSKLEL
101: PHLVLYPSNS SLVEMVPKLP CFGSGSFSEM VASFGLPECG QTANSGCPPN FPPNKEGLTE KSLNGAQSQE GHQISEGDAV DASPSGKRRK SSFDPRPPLN
201: TSKSADGEQP KGLPWENSEF SKEQEEKKLK IDQNMSPNLR GKQPNKHAKD NSSNGEAPKE NYIHVRARRG QATNSHSLAE RVRREKISER MRLLQELVPG
301: CNKITGKAVM LDEIINYVQS LQQQVEFLSM KLATVNPELN IDIERLLSKD ILNSRGGSTS VLGFGPGMSS SHPYPHGISQ GTLPGIPTPQ FHSTQAVWDG
401: ELQSLLQMGF DSNPSSNNLG TNAGRSKLEL
001: MGGESNEGGE MGFKHGDDES GGISRVGITS MPLYAKADPF FSSADWDPVV NAAAAGFSSS HYHPSMAMDN PGMSCFSHYQ PGSVSGFAAD MPASLLPFGD
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
Arabidopsis Description
BHLH74Transcription factor bHLH74 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKN9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.