Factsheet for VIT_07s0151g00450.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0244g00010.t01	Wine grape	nucleus	23.13	35.56
VIT_01s0026g01140.t01	Wine grape	nucleus	22.89	34.3
VIT_18s0001g08600.t01	Wine grape	nucleus	35.18	33.95
VIT_17s0000g05370.t01	Wine grape	nucleus	23.13	33.8
VIT_04s0023g01930.t01	Wine grape	nucleus	26.02	29.51
VIT_17s0000g00430.t01	Wine grape	nucleus	23.86	28.37
VIT_01s0010g00740.t01	Wine grape	nucleus	30.36	26.87
VIT_03s0038g04760.t01	Wine grape	nucleus	29.16	26.71
VIT_08s0007g07870.t01	Wine grape	nucleus	21.2	24.18
VIT_05s0029g00390.t01	Wine grape	nucleus	29.64	22.61

Protein Annotations

EntrezGene:100853160	wikigene:100853160	MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EMBL:AM444297
ProteinID:CAN71939	ProteinID:CAN71939.1	ProteinID:CBI41042	ProteinID:CBI41042.3	UniProt:D7UE77	EMBL:FN596793
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	EntrezGene:LOC100853160	wikigene:LOC100853160	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565
PANTHER:PTHR12565:SF184	SMART:SM00353	SUPFAM:SSF47459	TIGR:TC60236	UniParc:UPI0001BE5618	ArrayExpress:VIT_07s0151g00450
EnsemblPlantsGene:VIT_07s0151g00450	EnsemblPlants:VIT_07s0151g00450.t01	unigene:Vvi.5511	RefSeq:XP_003634844	RefSeq:XP_003634844.1	RefSeq:XP_010645300.1
RefSeq:XP_010645301.1	RefSeq:XP_010645303.1	RefSeq:XP_019073109.1	RefSeq:XP_019073110.1	InterPro:bHLH_dom	:

Description

No Description!

Coordinates

chr7_random:+:923639..926561

Molecular Weight (calculated)

45572.2 Da

IEP (calculated)

6.093

GRAVY (calculated)

-0.516

Length

415 amino acids

Sequence
(BLAST)

001: MDTDGSGDSG FEHKDGSLLD CPSLGIFTSL SSLNGVTSIF TGDYDPPVPL AHNADIIGLP PLKTHDQIDD LYAGNALENQ GMSSTIHLTQ YSSDPRFVEL
101: VPNFPHFSTA GFSEMVTPRC LPKCHNIGCP PDHPLEKNGT RKTSNLQNKT NNCAQMEGCQ IADDGTMELS PIEKKRKRLA DDRSQFAHLK NMEAAQPKDE
201: CLGRQDERKQ KAEQKIVANN CGKLIGAEVK MSSQTGEAPK EDYIHVRAKR GQATNSHSLA ERVRRERISE RMKFLQDLVP GCNKITGKAV MLDEIINYVQ
301: SLQRQVEFLS MKLATVYPEM NVQIERILSS DIHHSKGGTA PILGFGPGMN SAYPIPQVTL QAISPAIESS TLQSSPMSPM PNVWDNELQG IKQMGFTSTA
401: DLENLETSGC TKVQL

Best Arabidopsis Sequence Match ( AT1G10120.1 )
(BLAST)

001: MGGESNEGGE MGFKHGDDES GGISRVGITS MPLYAKADPF FSSADWDPVV NAAAAGFSSS HYHPSMAMDN PGMSCFSHYQ PGSVSGFAAD MPASLLPFGD
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL

Arabidopsis Description

BHLH74Transcription factor bHLH74 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKN9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.