Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG95332 | Soybean | nucleus | 65.11 | 64.75 |
| PGSC0003DMT400021130 | Potato | nucleus | 60.99 | 61.67 |
| Solyc10g079070.1.1 | Tomato | nucleus | 60.16 | 60.66 |
| KRH71879 | Soybean | nucleus | 58.79 | 60.45 |
| KRH33022 | Soybean | nucleus | 57.97 | 59.1 |
| Bra004679.1-P | Field mustard | nucleus | 47.53 | 57.28 |
| CDY53497 | Canola | nucleus | 48.35 | 56.96 |
| AT2G42300.1 | Thale cress | nucleus | 51.1 | 56.88 |
| KRH67006 | Soybean | nucleus | 62.36 | 56.75 |
| CDX79883 | Canola | nucleus | 46.43 | 55.96 |
| CDX98249 | Canola | nucleus | 42.58 | 55.36 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 20.88 | 55.07 |
| CDX67710 | Canola | nucleus | 48.63 | 54.97 |
| CDX88966 | Canola | nucleus | 50.0 | 54.82 |
| Bra003300.1-P | Field mustard | nucleus | 48.08 | 54.35 |
| CDX71994 | Canola | nucleus | 53.85 | 54.29 |
| CDY06074 | Canola | nucleus | 52.75 | 53.93 |
| Bra007358.1-P | Field mustard | nucleus | 53.02 | 53.91 |
| Bra014603.1-P | Field mustard | nucleus | 50.82 | 53.47 |
| Os06t0613500-01 | Rice | cytosol, nucleus | 25.55 | 52.25 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 50.27 | 50.14 |
| GSMUA_Achr4P19330_001 | Banana | nucleus | 51.65 | 48.58 |
| TraesCS7B01G303300.1 | Wheat | nucleus | 41.21 | 47.77 |
| AT3G57800.1 | Thale cress | nucleus | 55.77 | 47.65 |
| TraesCS7D01G397300.1 | Wheat | nucleus, plastid | 40.93 | 47.15 |
| GSMUA_Achr7P06330_001 | Banana | nucleus | 47.25 | 46.99 |
| CDY47665 | Canola | cytosol | 32.42 | 45.91 |
| TraesCS7A01G403900.1 | Wheat | cytosol | 18.96 | 44.81 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 34.62 | 43.45 |
| HORVU7Hr1G094690.1 | Barley | plastid | 29.12 | 42.91 |
| Zm00001d046759_P001 | Maize | plastid | 40.38 | 41.29 |
| Zm00001d036807_P001 | Maize | nucleus | 40.66 | 40.0 |
| OQU76702 | Sorghum | nucleus | 42.03 | 37.32 |
| VIT_01s0244g00010.t01 | Wine grape | nucleus | 24.73 | 33.33 |
| VIT_17s0000g05370.t01 | Wine grape | nucleus | 22.53 | 28.87 |
| VIT_01s0026g01140.t01 | Wine grape | nucleus | 21.43 | 28.16 |
| VIT_17s0000g00430.t01 | Wine grape | nucleus | 25.0 | 26.07 |
| VIT_04s0023g01930.t01 | Wine grape | nucleus | 25.27 | 25.14 |
| VIT_03s0038g04760.t01 | Wine grape | nucleus | 27.75 | 22.3 |
| VIT_18s0001g08600.t01 | Wine grape | nucleus | 26.1 | 22.09 |
| VIT_01s0010g00740.t01 | Wine grape | nucleus | 28.3 | 21.96 |
| VIT_07s0151g00450.t01 | Wine grape | nucleus | 24.18 | 21.2 |
| VIT_05s0029g00390.t01 | Wine grape | nucleus | 28.85 | 19.3 |
Protein Annotations
| EntrezGene:100241856 | wikigene:100241856 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | ProteinID:CBI29895 |
| ProteinID:CBI29895.3 | UniProt:D7TI19 | EMBL:FN595991 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EntrezGene:LOC100241856 | wikigene:LOC100241856 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF112 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI00015CA9EC | ArrayExpress:VIT_08s0007g07870 | EnsemblPlantsGene:VIT_08s0007g07870 | EnsemblPlants:VIT_08s0007g07870.t01 | unigene:Vvi.14239 | RefSeq:XP_002282897 |
| RefSeq:XP_002282897.1 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr8:+:21302639..21308510
Molecular Weight (calculated)
40280.0 Da
IEP (calculated)
5.640
GRAVY (calculated)
-0.748
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MERIAGTGGR SGSTGGEKEE IGAESFLFGE EIQRLMTGPP ENGSSFTALL GLPANQAMEL LHSQESDTAP AELSGEAWRD NHMNPHKLYY CSPTFPANTT
101: LIDRAARFSV FAAGENSPET SSVPSNSSHK VKNEPTDTDS NPNSLPPLIS NPTVENKNQR STKRKEREKK AKGSTKKCKN ASNETSEEAE KLPYVHVRAR
201: RGQATDSHSL AERARREKIN ARMKLLQELV PGCNKISGTA LVLDEIISHV QSLQRQVEFL SMRLAAVNPR IDFNLDSLLA PESGSLVDSN FPSMVMPLMW
301: PDVQANENRQ PYQQLWNDDT LHQPVWGREE DDPHNFIAPE HSLLSYDSSA NSGSLQSNQL KMEL
101: LIDRAARFSV FAAGENSPET SSVPSNSSHK VKNEPTDTDS NPNSLPPLIS NPTVENKNQR STKRKEREKK AKGSTKKCKN ASNETSEEAE KLPYVHVRAR
201: RGQATDSHSL AERARREKIN ARMKLLQELV PGCNKISGTA LVLDEIISHV QSLQRQVEFL SMRLAAVNPR IDFNLDSLLA PESGSLVDSN FPSMVMPLMW
301: PDVQANENRQ PYQQLWNDDT LHQPVWGREE DDPHNFIAPE HSLLSYDSSA NSGSLQSNQL KMEL
001: MDLTGGFGAR SGGVGPCREP IGLESLHLGD EFRQLVTTLP PENPGGSFTA LLELPPTQAV ELLHFTDSSS SQQAAVTGIG GEIPPPLHSF GGTLAFPSNS
101: VLMERAARFS VIATEQQNGN ISGETPTSSV PSNSSANLDR VKTEPAETDS SQRLISDSAI ENQIPCPNQN NRNGKRKDFE KKGKSSTKKN KSSEENEKLP
201: YVHVRARRGQ ATDSHSLAER ARREKINARM KLLQELVPGC DKIQGTALVL DEIINHVQSL QRQVEMLSMR LAAVNPRIDF NLDTILASEN GSLMDGSFNA
301: APMQLAWPQQ AIETEQSFHH RQLQQPPTQQ WPFDGLNQPV WGREEDQAHG NDNSNLMAVS ENVMVASANL HPNQVKMEL
101: VLMERAARFS VIATEQQNGN ISGETPTSSV PSNSSANLDR VKTEPAETDS SQRLISDSAI ENQIPCPNQN NRNGKRKDFE KKGKSSTKKN KSSEENEKLP
201: YVHVRARRGQ ATDSHSLAER ARREKINARM KLLQELVPGC DKIQGTALVL DEIINHVQSL QRQVEMLSMR LAAVNPRIDF NLDTILASEN GSLMDGSFNA
301: APMQLAWPQQ AIETEQSFHH RQLQQPPTQQ WPFDGLNQPV WGREEDQAHG NDNSNLMAVS ENVMVASANL HPNQVKMEL
Arabidopsis Description
BHLH60Transcription factor bHLH60 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAI1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.