Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003300.1-P | Field mustard | nucleus | 99.38 | 99.38 |
| CDX98249 | Canola | nucleus | 76.71 | 88.21 |
| CDX88966 | Canola | nucleus | 75.78 | 73.49 |
| CDX71994 | Canola | nucleus | 82.3 | 73.41 |
| CDY06074 | Canola | nucleus | 81.06 | 73.31 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 30.75 | 71.74 |
| CDY47665 | Canola | cytosol | 53.11 | 66.54 |
| CDY53497 | Canola | nucleus | 61.49 | 64.08 |
| AT3G57800.1 | Thale cress | nucleus | 84.47 | 63.85 |
| CDX79883 | Canola | nucleus | 59.01 | 62.91 |
| VIT_08s0007g07870.t01 | Wine grape | nucleus | 54.97 | 48.63 |
| KRH71879 | Soybean | nucleus | 50.0 | 45.48 |
| KRH33022 | Soybean | nucleus | 49.38 | 44.54 |
| KRG95332 | Soybean | nucleus | 50.62 | 44.54 |
| TraesCS7B01G303300.1 | Wheat | nucleus | 41.93 | 42.99 |
| TraesCS7D01G397300.1 | Wheat | nucleus, plastid | 41.61 | 42.41 |
| PGSC0003DMT400021130 | Potato | nucleus | 47.2 | 42.22 |
| KRH67006 | Soybean | nucleus | 50.93 | 41.0 |
| Solyc10g079070.1.1 | Tomato | nucleus | 45.96 | 41.0 |
| HORVU7Hr1G094690.1 | Barley | plastid | 30.43 | 39.68 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 44.72 | 39.45 |
| GSMUA_Achr7P06330_001 | Banana | nucleus | 44.41 | 39.07 |
| GSMUA_Achr4P19330_001 | Banana | nucleus | 46.89 | 39.02 |
| TraesCS7A01G403900.1 | Wheat | cytosol | 18.63 | 38.96 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 33.54 | 37.24 |
| Zm00001d046759_P001 | Maize | plastid | 40.37 | 36.52 |
| Zm00001d036807_P001 | Maize | nucleus | 40.99 | 35.68 |
| OQU76702 | Sorghum | nucleus | 41.61 | 32.68 |
| CDX76288 | Canola | nucleus | 24.53 | 31.6 |
| CDY18099 | Canola | nucleus | 21.74 | 31.39 |
| CDX75440 | Canola | nucleus | 31.37 | 30.7 |
| CDY08308 | Canola | nucleus | 27.64 | 30.48 |
| CDY37979 | Canola | nucleus | 24.84 | 30.08 |
| CDY17466 | Canola | nucleus | 25.78 | 29.86 |
| CDX69067 | Canola | nucleus | 31.37 | 29.71 |
| CDX93427 | Canola | nucleus | 24.53 | 29.48 |
| CDY64034 | Canola | nucleus | 27.95 | 29.32 |
| CDY05670 | Canola | nucleus | 22.98 | 28.68 |
| CDY72360 | Canola | cytosol | 13.35 | 28.67 |
| CDY45806 | Canola | nucleus | 25.78 | 28.33 |
| CDY25986 | Canola | plastid | 18.94 | 27.98 |
| CDX84885 | Canola | nucleus | 25.47 | 27.61 |
| CDY33821 | Canola | mitochondrion, plastid | 16.77 | 27.55 |
| CDX87255 | Canola | nucleus, plastid | 23.91 | 27.5 |
| CDX86296 | Canola | nucleus | 22.98 | 27.31 |
| CDX77488 | Canola | nucleus | 26.71 | 26.14 |
| CDY56230 | Canola | nucleus | 26.71 | 25.83 |
| CDX85122 | Canola | nucleus | 26.4 | 25.68 |
| CDY31048 | Canola | nucleus | 24.22 | 24.84 |
| CDY20659 | Canola | nucleus | 24.53 | 23.72 |
| CDY22605 | Canola | nucleus | 25.78 | 23.51 |
| CDY63738 | Canola | nucleus | 24.84 | 23.39 |
| CDY53834 | Canola | nucleus | 25.16 | 23.34 |
| CDY51061 | Canola | nucleus | 31.06 | 23.09 |
| CDY35923 | Canola | nucleus, plastid | 31.99 | 22.99 |
| CDY28061 | Canola | nucleus | 31.99 | 22.74 |
| CDY45835 | Canola | nucleus | 31.37 | 22.3 |
| CDX95974 | Canola | nucleus | 32.3 | 21.71 |
| CDX81575 | Canola | nucleus | 31.68 | 21.47 |
| CDY33568 | Canola | nucleus | 31.99 | 21.37 |
| CDY61420 | Canola | extracellular | 9.01 | 21.32 |
| CDY61581 | Canola | plastid | 12.11 | 21.31 |
| CDX86297 | Canola | nucleus | 31.06 | 20.41 |
| CDX85347 | Canola | nucleus | 30.75 | 20.16 |
| CDY57925 | Canola | nucleus | 24.53 | 19.85 |
| Os09t0474051-01 | Rice | plastid | 16.15 | 8.89 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | GO:A0A078BSX5 | EnsemblPlants:CDX67710 | ProteinID:CDX67710 |
| ProteinID:CDX67710.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00098895001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF112 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE79A2 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaA07g17500D
Coordinates
chrLK031787:-:1912429..1915507
Molecular Weight (calculated)
35587.5 Da
IEP (calculated)
7.082
GRAVY (calculated)
-0.793
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLTGEFGAR SDRGERCREV TGLESLHLGD EFRQLALPPE NTGGFTALLE LPPTQAVNLL RFTDSPSSSS QAAAVTGIAP TPPLHSYGTL TFPSNSLLME
101: RAARFSTEHQ QNGNVSGTSS VPSNSSVKTE PAETDSSQAV NSRSGKRKDS DKKAKSSTKK KKNKSSEENE KLPYVHVRAR RGQATDSHSL AERARREKIN
201: ARMKLLQELV PGCDKIQGTA LVLDEIINHV QSLQRQVEML SMRLASVNPR IDFNLDTILA SENGSLMDGS FNGTAMQVAW PHQVTETEQS YHHRQLQQPQ
301: QWPFDGLNQR AWGKEEDQDH GQ
101: RAARFSTEHQ QNGNVSGTSS VPSNSSVKTE PAETDSSQAV NSRSGKRKDS DKKAKSSTKK KKNKSSEENE KLPYVHVRAR RGQATDSHSL AERARREKIN
201: ARMKLLQELV PGCDKIQGTA LVLDEIINHV QSLQRQVEML SMRLASVNPR IDFNLDTILA SENGSLMDGS FNGTAMQVAW PHQVTETEQS YHHRQLQQPQ
301: QWPFDGLNQR AWGKEEDQDH GQ
001: MDLTGGFGAR SGGVGPCREP IGLESLHLGD EFRQLVTTLP PENPGGSFTA LLELPPTQAV ELLHFTDSSS SQQAAVTGIG GEIPPPLHSF GGTLAFPSNS
101: VLMERAARFS VIATEQQNGN ISGETPTSSV PSNSSANLDR VKTEPAETDS SQRLISDSAI ENQIPCPNQN NRNGKRKDFE KKGKSSTKKN KSSEENEKLP
201: YVHVRARRGQ ATDSHSLAER ARREKINARM KLLQELVPGC DKIQGTALVL DEIINHVQSL QRQVEMLSMR LAAVNPRIDF NLDTILASEN GSLMDGSFNA
301: APMQLAWPQQ AIETEQSFHH RQLQQPPTQQ WPFDGLNQPV WGREEDQAHG NDNSNLMAVS ENVMVASANL HPNQVKMEL
101: VLMERAARFS VIATEQQNGN ISGETPTSSV PSNSSANLDR VKTEPAETDS SQRLISDSAI ENQIPCPNQN NRNGKRKDFE KKGKSSTKKN KSSEENEKLP
201: YVHVRARRGQ ATDSHSLAER ARREKINARM KLLQELVPGC DKIQGTALVL DEIINHVQSL QRQVEMLSMR LAAVNPRIDF NLDTILASEN GSLMDGSFNA
301: APMQLAWPQQ AIETEQSFHH RQLQQPPTQQ WPFDGLNQPV WGREEDQAHG NDNSNLMAVS ENVMVASANL HPNQVKMEL
Arabidopsis Description
BHLH60Transcription factor bHLH60 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAI1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.