Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019962.1-P | Field mustard | nucleus | 82.66 | 97.05 |
| CDY63738 | Canola | nucleus | 81.91 | 95.32 |
| CDY31048 | Canola | nucleus | 60.05 | 76.11 |
| CDY22605 | Canola | nucleus | 66.08 | 74.5 |
| CDY20659 | Canola | nucleus | 61.56 | 73.57 |
| CDY53834 | Canola | nucleus | 64.07 | 73.49 |
| KRH52141 | Soybean | nucleus | 29.4 | 39.13 |
| VIT_18s0001g08600.t01 | Wine grape | nucleus | 42.21 | 39.07 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 21.61 | 38.05 |
| Solyc04g077480.2.1 | Tomato | nucleus | 35.43 | 36.91 |
| KRH61450 | Soybean | nucleus | 34.67 | 36.7 |
| KRH15460 | Soybean | nucleus | 39.45 | 36.6 |
| PGSC0003DMT400012591 | Potato | nucleus | 34.92 | 36.39 |
| KRG88634 | Soybean | nucleus, plastid | 39.45 | 36.09 |
| Os03t0728900-00 | Rice | cytosol, nucleus | 24.37 | 35.93 |
| CDY25986 | Canola | plastid | 18.84 | 34.4 |
| TraesCS4D01G058900.1 | Wheat | nucleus | 27.14 | 34.18 |
| CDY18099 | Canola | nucleus | 19.1 | 34.08 |
| OQU91059 | Sorghum | nucleus | 26.63 | 33.65 |
| Zm00001d033870_P001 | Maize | nucleus | 27.14 | 33.44 |
| TraesCS4A01G255800.3 | Wheat | nucleus | 27.14 | 33.23 |
| TraesCS4B01G059000.1 | Wheat | nucleus | 26.88 | 33.13 |
| CDX93427 | Canola | nucleus | 22.11 | 32.84 |
| HORVU4Hr1G009970.28 | Barley | nucleus | 26.63 | 32.82 |
| CDY37979 | Canola | nucleus | 21.86 | 32.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.12 | 32.51 |
| CDY72360 | Canola | cytosol | 11.81 | 31.33 |
| CDX76288 | Canola | nucleus | 19.6 | 31.2 |
| CDY45806 | Canola | nucleus | 22.61 | 30.72 |
| CDY05670 | Canola | nucleus | 19.85 | 30.62 |
| CDX86296 | Canola | nucleus | 20.6 | 30.26 |
| CDX84885 | Canola | nucleus | 22.36 | 29.97 |
| CDY17466 | Canola | nucleus | 20.1 | 28.78 |
| CDY33821 | Canola | mitochondrion, plastid | 14.07 | 28.57 |
| CDX77488 | Canola | nucleus | 23.37 | 28.27 |
| CDX85122 | Canola | nucleus | 23.37 | 28.1 |
| CDY08308 | Canola | nucleus | 20.6 | 28.08 |
| CDX75440 | Canola | nucleus | 23.12 | 27.96 |
| CDX87255 | Canola | nucleus, plastid | 19.6 | 27.86 |
| CDY56230 | Canola | nucleus | 22.86 | 27.33 |
| CDX98249 | Canola | nucleus | 19.1 | 27.14 |
| CDY64034 | Canola | nucleus | 20.6 | 26.71 |
| CDX69067 | Canola | nucleus | 22.61 | 26.47 |
| CDY61581 | Canola | plastid | 12.06 | 26.23 |
| CDX79883 | Canola | nucleus | 19.35 | 25.5 |
| CDY53497 | Canola | nucleus | 19.1 | 24.6 |
| CDX67710 | Canola | nucleus | 19.85 | 24.53 |
| CDY45835 | Canola | nucleus | 26.88 | 23.62 |
| Zm00001d013357_P001 | Maize | nucleus | 20.6 | 23.56 |
| CDY33568 | Canola | nucleus | 28.39 | 23.44 |
| CDX95974 | Canola | nucleus | 28.14 | 23.38 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 8.04 | 23.19 |
| CDX81575 | Canola | nucleus | 27.64 | 23.16 |
| CDY28061 | Canola | nucleus | 26.13 | 22.96 |
| CDX88966 | Canola | nucleus | 19.1 | 22.89 |
| CDY35923 | Canola | nucleus, plastid | 25.38 | 22.54 |
| CDX71994 | Canola | nucleus | 20.35 | 22.44 |
| CDY06074 | Canola | nucleus | 19.85 | 22.19 |
| CDY51061 | Canola | nucleus | 24.12 | 22.17 |
| CDY61420 | Canola | extracellular | 7.54 | 22.06 |
| CDX86297 | Canola | nucleus | 25.63 | 20.82 |
| CDX85347 | Canola | nucleus | 25.63 | 20.77 |
| CDY47665 | Canola | cytosol | 12.81 | 19.84 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | GO:A0A078J548 | UniProt:A0A078J548 | EnsemblPlants:CDY57925 |
| ProteinID:CDY57925 | ProteinID:CDY57925.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00022857001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EF4299 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaA06g37950DBnaA06g37950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J548]
Coordinates
chrLK033617:+:5021..6992
Molecular Weight (calculated)
44526.5 Da
IEP (calculated)
7.762
GRAVY (calculated)
-0.677
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGESNEGEM GLNHGDDQSG ISRVGMPLYA KSDPFFSSTD WDPAVNVGGF SSSHYPSLAM DNPGMSCFPH YHQPGSSSGY PDMPASLLPF GDCGGGGGGH
101: FLGSDKKEES VGRLVRAGDG HQVSDDVVLG GSSNRKRRQP EAESQWNKKA VEEFQEDPQS QKKQKNDQSK EKMTKESSQS DEAPKENYIH MRARRGQATN
201: SHSLAERVRR EKISERMRLL QELVPGCNKI TGKAVMLDEI INYVQSLQQQ VEFLSMKLST VNPELNIDID RLLAKDSRDR NTPTLGLNPF ARFQGTIPNI
301: STTTAPQYNS LPQASNNSRN NTSCFCHHFK SIETRALVLS RMSSKENLKR ERVCIEEGFG LKYHICSSML LFFLLKKNTR MIWILSCSFF FLNQECIY
101: FLGSDKKEES VGRLVRAGDG HQVSDDVVLG GSSNRKRRQP EAESQWNKKA VEEFQEDPQS QKKQKNDQSK EKMTKESSQS DEAPKENYIH MRARRGQATN
201: SHSLAERVRR EKISERMRLL QELVPGCNKI TGKAVMLDEI INYVQSLQQQ VEFLSMKLST VNPELNIDID RLLAKDSRDR NTPTLGLNPF ARFQGTIPNI
301: STTTAPQYNS LPQASNNSRN NTSCFCHHFK SIETRALVLS RMSSKENLKR ERVCIEEGFG LKYHICSSML LFFLLKKNTR MIWILSCSFF FLNQECIY
001: MGGESNEGGE MGFKHGDDES GGISRVGITS MPLYAKADPF FSSADWDPVV NAAAAGFSSS HYHPSMAMDN PGMSCFSHYQ PGSVSGFAAD MPASLLPFGD
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
Arabidopsis Description
BHLH74Transcription factor bHLH74 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKN9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.