Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31048 | Canola | nucleus | 91.89 | 97.45 |
| Bra018461.1-P | Field mustard | nucleus | 85.59 | 88.51 |
| CDY22605 | Canola | nucleus | 79.88 | 75.35 |
| CDY53834 | Canola | nucleus | 78.38 | 75.22 |
| AT1G10120.1 | Thale cress | nucleus | 80.48 | 73.22 |
| CDY63738 | Canola | nucleus | 72.67 | 70.76 |
| CDY57925 | Canola | nucleus | 73.57 | 61.56 |
| Solyc04g077480.2.1 | Tomato | nucleus | 45.65 | 39.79 |
| VIT_18s0001g08600.t01 | Wine grape | nucleus | 51.35 | 39.77 |
| PGSC0003DMT400012591 | Potato | nucleus | 45.05 | 39.27 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 26.43 | 38.94 |
| KRH52141 | Soybean | nucleus | 34.53 | 38.46 |
| Os03t0728900-00 | Rice | cytosol, nucleus | 30.93 | 38.15 |
| CDY72360 | Canola | cytosol | 16.82 | 37.33 |
| KRH15460 | Soybean | nucleus | 47.45 | 36.83 |
| KRH61450 | Soybean | nucleus | 41.14 | 36.44 |
| KRG88634 | Soybean | nucleus, plastid | 46.85 | 35.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.73 | 34.98 |
| TraesCS4D01G058900.1 | Wheat | nucleus | 33.03 | 34.81 |
| OQU91059 | Sorghum | nucleus | 32.73 | 34.6 |
| CDY25986 | Canola | plastid | 22.22 | 33.95 |
| TraesCS4B01G059000.1 | Wheat | nucleus | 32.73 | 33.75 |
| Zm00001d033870_P001 | Maize | nucleus | 32.73 | 33.75 |
| TraesCS4A01G255800.3 | Wheat | nucleus | 32.73 | 33.54 |
| CDY18099 | Canola | nucleus | 22.22 | 33.18 |
| HORVU4Hr1G009970.28 | Barley | nucleus | 32.13 | 33.13 |
| CDX93427 | Canola | nucleus | 26.43 | 32.84 |
| CDY37979 | Canola | nucleus | 26.13 | 32.71 |
| CDY05670 | Canola | nucleus | 25.23 | 32.56 |
| CDX86296 | Canola | nucleus | 26.13 | 32.1 |
| CDX76288 | Canola | nucleus | 24.02 | 32.0 |
| CDY45806 | Canola | nucleus | 27.33 | 31.06 |
| CDX77488 | Canola | nucleus | 30.33 | 30.7 |
| CDX85122 | Canola | nucleus | 30.33 | 30.51 |
| CDY08308 | Canola | nucleus | 26.73 | 30.48 |
| CDX84885 | Canola | nucleus | 27.03 | 30.3 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 12.31 | 29.71 |
| CDY17466 | Canola | nucleus | 24.62 | 29.5 |
| CDY56230 | Canola | nucleus | 29.13 | 29.13 |
| CDY33821 | Canola | mitochondrion, plastid | 17.12 | 29.08 |
| CDY64034 | Canola | nucleus | 26.73 | 28.99 |
| CDX75440 | Canola | nucleus | 27.93 | 28.27 |
| CDX87255 | Canola | nucleus, plastid | 23.72 | 28.21 |
| CDX69067 | Canola | nucleus | 27.63 | 27.06 |
| CDX98249 | Canola | nucleus | 22.22 | 26.43 |
| CDY61581 | Canola | plastid | 14.41 | 26.23 |
| CDY53497 | Canola | nucleus | 24.02 | 25.89 |
| CDX79883 | Canola | nucleus | 23.42 | 25.83 |
| Zm00001d013357_P001 | Maize | nucleus | 26.43 | 25.29 |
| CDX88966 | Canola | nucleus | 24.62 | 24.7 |
| CDX67710 | Canola | nucleus | 23.72 | 24.53 |
| CDY61420 | Canola | extracellular | 9.91 | 24.26 |
| CDY33568 | Canola | nucleus | 34.53 | 23.86 |
| CDX95974 | Canola | nucleus | 34.23 | 23.8 |
| CDY06074 | Canola | nucleus | 24.92 | 23.31 |
| CDX71994 | Canola | nucleus | 25.23 | 23.27 |
| CDY45835 | Canola | nucleus | 31.53 | 23.18 |
| CDY28061 | Canola | nucleus | 30.93 | 22.74 |
| CDX81575 | Canola | nucleus | 32.13 | 22.53 |
| CDY35923 | Canola | nucleus, plastid | 30.03 | 22.32 |
| CDY51061 | Canola | nucleus | 28.83 | 22.17 |
| CDX86297 | Canola | nucleus | 30.93 | 21.02 |
| CDX85347 | Canola | nucleus | 30.93 | 20.98 |
| CDY47665 | Canola | cytosol | 14.11 | 18.29 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | GO:A0A078G5M3 | UniProt:A0A078G5M3 | EnsemblPlants:CDY20659 |
| ProteinID:CDY20659 | ProteinID:CDY20659.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00012844001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE8C75 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaC08g13990DBnaC08g13990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G5M3]
Coordinates
chrLK032110:+:495457..500464
Molecular Weight (calculated)
36886.4 Da
IEP (calculated)
6.721
GRAVY (calculated)
-0.707
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGENNEDWD PVVSGGGFSS SHYTSMVMDN PGMSCFPHYQ TGSGYPDMPP SLLPFGDCVG GGPVLGSDKK GESVGRLIRA GESHQVSDDV VLGASPSRKR
101: RQLEAESSQR NKKAVEEFLE EPQRGSDQSQ KKHKNDQSKE KESSQSEEAP EKNYIHMRAR RGQATNSHSL AERVRREKIS ERMRLLQELV PGCNKITGKA
201: VMLDEIINYV QSLQQQVEFL SMKLATVNPE LNIDIDRILA KDLMQSRDVS STPTLGLNPF SGFQGTIPNV PTTTNPQYNP LHQASNKSEL QSLYQMGFVS
301: NPSTMSSFSP NNVKAKSVHL LLPYLLDDFK SCY
101: RQLEAESSQR NKKAVEEFLE EPQRGSDQSQ KKHKNDQSKE KESSQSEEAP EKNYIHMRAR RGQATNSHSL AERVRREKIS ERMRLLQELV PGCNKITGKA
201: VMLDEIINYV QSLQQQVEFL SMKLATVNPE LNIDIDRILA KDLMQSRDVS STPTLGLNPF SGFQGTIPNV PTTTNPQYNP LHQASNKSEL QSLYQMGFVS
301: NPSTMSSFSP NNVKAKSVHL LLPYLLDDFK SCY
001: MGGESNEGGE MGFKHGDDES GGISRVGITS MPLYAKADPF FSSADWDPVV NAAAAGFSSS HYHPSMAMDN PGMSCFSHYQ PGSVSGFAAD MPASLLPFGD
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
Arabidopsis Description
BHLH74Transcription factor bHLH74 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKN9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.