Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014972.1-P | Field mustard | nucleus | 95.47 | 96.05 |
| CDX77488 | Canola | nucleus | 95.47 | 96.05 |
| CDY72360 | Canola | cytosol | 38.97 | 86.0 |
| CDY56230 | Canola | nucleus | 81.57 | 81.08 |
| CDY18099 | Canola | nucleus | 53.47 | 79.37 |
| AT3G23690.1 | Thale cress | nucleus | 82.78 | 73.85 |
| CDY08308 | Canola | nucleus | 57.7 | 65.41 |
| CDY64034 | Canola | nucleus | 59.21 | 63.84 |
| CDY25986 | Canola | plastid | 27.49 | 41.74 |
| CDY05670 | Canola | nucleus | 31.12 | 39.92 |
| CDY33821 | Canola | mitochondrion, plastid | 23.26 | 39.29 |
| CDX86296 | Canola | nucleus | 32.02 | 39.11 |
| CDY45806 | Canola | nucleus | 31.72 | 35.84 |
| CDY37979 | Canola | nucleus | 28.4 | 35.34 |
| CDX93427 | Canola | nucleus | 28.4 | 35.07 |
| CDX84885 | Canola | nucleus | 31.42 | 35.02 |
| CDX76288 | Canola | nucleus | 25.38 | 33.6 |
| CDX87255 | Canola | nucleus, plastid | 27.49 | 32.5 |
| CDY31048 | Canola | nucleus | 29.61 | 31.21 |
| Solyc09g097870.2.1 | Tomato | nucleus | 40.48 | 31.09 |
| PGSC0003DMT400042791 | Potato | nucleus | 40.48 | 30.52 |
| CDY20659 | Canola | nucleus | 30.51 | 30.33 |
| CDY61581 | Canola | plastid | 16.62 | 30.05 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 12.39 | 29.71 |
| CDY17466 | Canola | nucleus | 24.77 | 29.5 |
| CDY53834 | Canola | nucleus | 30.21 | 28.82 |
| Solyc12g098620.1.1 | Tomato | nucleus | 35.05 | 28.71 |
| CDX98249 | Canola | nucleus | 24.17 | 28.57 |
| PGSC0003DMT400011651 | Potato | nucleus | 35.35 | 28.33 |
| CDY22605 | Canola | nucleus | 30.21 | 28.33 |
| CDX75440 | Canola | nucleus | 28.1 | 28.27 |
| CDY61420 | Canola | extracellular | 11.18 | 27.21 |
| CDY63738 | Canola | nucleus | 28.1 | 27.19 |
| CDX79883 | Canola | nucleus | 24.47 | 26.82 |
| CDX69067 | Canola | nucleus | 27.49 | 26.76 |
| CDY51061 | Canola | nucleus | 34.74 | 26.56 |
| CDX88966 | Canola | nucleus | 26.59 | 26.51 |
| CDX67710 | Canola | nucleus | 25.68 | 26.4 |
| CDY53497 | Canola | nucleus | 23.87 | 25.57 |
| CDX86297 | Canola | nucleus | 37.46 | 25.31 |
| CDX85347 | Canola | nucleus | 37.46 | 25.25 |
| CDX71994 | Canola | nucleus | 27.49 | 25.21 |
| CDY28061 | Canola | nucleus | 34.44 | 25.17 |
| CDY35923 | Canola | nucleus, plastid | 33.84 | 25.0 |
| CDY06074 | Canola | nucleus | 26.89 | 25.0 |
| CDY45835 | Canola | nucleus | 33.23 | 24.28 |
| CDY57925 | Canola | nucleus | 28.1 | 23.37 |
| CDX81575 | Canola | nucleus | 32.33 | 22.53 |
| CDY33568 | Canola | nucleus | 32.33 | 22.2 |
| VIT_05s0029g00390.t01 | Wine grape | nucleus | 36.25 | 22.06 |
| CDX95974 | Canola | nucleus | 31.72 | 21.92 |
| CDY47665 | Canola | cytosol | 16.62 | 21.4 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | GO:A0A078D7P9 | EnsemblPlants:CDX85122 | ProteinID:CDX85122 |
| ProteinID:CDX85122.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00142647001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF184 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE4825 | InterPro:bHLH_dom | SEG:seg |
Description
BnaC07g07840D
Coordinates
chrLK031840:-:891667..893728
Molecular Weight (calculated)
36267.4 Da
IEP (calculated)
5.945
GRAVY (calculated)
-0.723
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MENQSIKYVA LGQSDPFGNN VNEGTIGDLL VGRFCNPQET ISPYPAGNLR FPPYPGQFGS QDSNKSSLLD PDLDRVQTAK PNSRKRKLIP SASASGGNGK
101: ESPASSSLTA SNSKVSGEIV GSKRSKQDEA GSSKKDDGNK DDAKPPEPPK DYIHVRARRG QATDSHSLAE RARREKISER MTLLQDLVPG CNRITGKAVM
201: LDEIINYVQS LQRQVEFLSM KLATINPRME FNPSAALSTE MVQPGEALTQ SLYSMACSEQ RLPSAYYSLA KNMPRFSDTQ FPSSDAFVQA ETQGFWDNDL
301: QSIVQMGFGD VQQQSNNNSC SEPTLQMKLE P
101: ESPASSSLTA SNSKVSGEIV GSKRSKQDEA GSSKKDDGNK DDAKPPEPPK DYIHVRARRG QATDSHSLAE RARREKISER MTLLQDLVPG CNRITGKAVM
201: LDEIINYVQS LQRQVEFLSM KLATINPRME FNPSAALSTE MVQPGEALTQ SLYSMACSEQ RLPSAYYSLA KNMPRFSDTQ FPSSDAFVQA ETQGFWDNDL
301: QSIVQMGFGD VQQQSNNNSC SEPTLQMKLE P
001: MNMDKETEQT LNYLPLGQSD PFGNGNEGTI GDFLGRYCNN PQEISPLTLQ SFSLNSQISE NFPISGGIRF PPYPGQFGSD REFGSQPTTQ ESNKSSLLDP
101: DSVSDRVHTT KSNSRKRKSI PSGNGKESPA SSSLTASNSK VSGENGGSKG GKRSKQDVAG SSKNGVEKCD SKGDNKDDAK PPEAPKDYIH VRARRGQATD
201: SHSLAERARR EKISERMTLL QDLVPGCNRI TGKAVMLDEI INYVQSLQRQ VEFLSMKLAT VNPRMEFNAN ASLSTEMIQP GESLTQSLYA MACSEQRLPS
301: AYYSLGKNMP RFSDTQFPSN DGFVHTETPG FWENNDLQSI VQMGFGDILQ QQSNNNNNNC SEPTLQMKLE P
101: DSVSDRVHTT KSNSRKRKSI PSGNGKESPA SSSLTASNSK VSGENGGSKG GKRSKQDVAG SSKNGVEKCD SKGDNKDDAK PPEAPKDYIH VRARRGQATD
201: SHSLAERARR EKISERMTLL QDLVPGCNRI TGKAVMLDEI INYVQSLQRQ VEFLSMKLAT VNPRMEFNAN ASLSTEMIQP GESLTQSLYA MACSEQRLPS
301: AYYSLGKNMP RFSDTQFPSN DGFVHTETPG FWENNDLQSI VQMGFGDILQ QQSNNNNNNC SEPTLQMKLE P
Arabidopsis Description
BHLH77Transcription factor bHLH77 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK48]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.