Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031700.1-P | Field mustard | nucleus | 89.91 | 95.41 |
| CDY22605 | Canola | nucleus | 93.08 | 91.5 |
| CDY31048 | Canola | nucleus | 74.06 | 81.85 |
| CDY20659 | Canola | nucleus | 75.22 | 78.38 |
| AT1G10120.1 | Thale cress | nucleus | 81.27 | 77.05 |
| CDY63738 | Canola | nucleus | 73.78 | 74.85 |
| CDY57925 | Canola | nucleus | 73.49 | 64.07 |
| KRH52141 | Soybean | nucleus | 35.45 | 41.14 |
| Solyc04g077480.2.1 | Tomato | nucleus | 44.38 | 40.31 |
| VIT_18s0001g08600.t01 | Wine grape | nucleus | 49.57 | 40.0 |
| PGSC0003DMT400012591 | Potato | nucleus | 43.8 | 39.79 |
| KRH61450 | Soybean | nucleus | 41.5 | 38.3 |
| KRH15460 | Soybean | nucleus | 46.4 | 37.53 |
| Os03t0728900-00 | Rice | cytosol, nucleus | 28.82 | 37.04 |
| KRG88634 | Soybean | nucleus, plastid | 46.4 | 37.01 |
| CDY72360 | Canola | cytosol | 15.85 | 36.67 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 23.63 | 36.28 |
| OQU91059 | Sorghum | nucleus | 32.56 | 35.87 |
| TraesCS4D01G058900.1 | Wheat | nucleus | 31.99 | 35.13 |
| Zm00001d033870_P001 | Maize | nucleus | 32.56 | 34.98 |
| CDY25986 | Canola | plastid | 21.33 | 33.95 |
| TraesCS4A01G255800.3 | Wheat | nucleus | 31.7 | 33.85 |
| TraesCS4B01G059000.1 | Wheat | nucleus | 31.41 | 33.75 |
| HORVU4Hr1G009970.28 | Barley | nucleus | 30.84 | 33.13 |
| CDX93427 | Canola | nucleus | 25.36 | 32.84 |
| CDY37979 | Canola | nucleus | 25.07 | 32.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.51 | 32.51 |
| CDY18099 | Canola | nucleus | 20.75 | 32.29 |
| CDX76288 | Canola | nucleus | 23.05 | 32.0 |
| CDY05670 | Canola | nucleus | 23.63 | 31.78 |
| CDX86296 | Canola | nucleus | 24.21 | 31.0 |
| CDY08308 | Canola | nucleus | 25.94 | 30.82 |
| CDY45806 | Canola | nucleus | 25.94 | 30.72 |
| CDX77488 | Canola | nucleus | 29.11 | 30.7 |
| CDX85122 | Canola | nucleus | 28.82 | 30.21 |
| CDX84885 | Canola | nucleus | 25.65 | 29.97 |
| CDX87255 | Canola | nucleus, plastid | 23.92 | 29.64 |
| CDY64034 | Canola | nucleus | 25.94 | 29.32 |
| CDY56230 | Canola | nucleus | 27.67 | 28.83 |
| CDY17466 | Canola | nucleus | 23.05 | 28.78 |
| CDX75440 | Canola | nucleus | 26.8 | 28.27 |
| CDY33821 | Canola | mitochondrion, plastid | 15.85 | 28.06 |
| CDX98249 | Canola | nucleus | 22.48 | 27.86 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 10.95 | 27.54 |
| CDX69067 | Canola | nucleus | 26.22 | 26.76 |
| CDY61581 | Canola | plastid | 13.83 | 26.23 |
| CDY61420 | Canola | extracellular | 10.09 | 25.74 |
| Zm00001d013357_P001 | Maize | nucleus | 25.65 | 25.57 |
| CDX67710 | Canola | nucleus | 23.34 | 25.16 |
| CDX79883 | Canola | nucleus | 21.61 | 24.83 |
| CDY53497 | Canola | nucleus | 21.9 | 24.6 |
| CDX88966 | Canola | nucleus | 23.34 | 24.4 |
| CDY33568 | Canola | nucleus | 32.85 | 23.65 |
| CDX95974 | Canola | nucleus | 32.56 | 23.59 |
| CDY06074 | Canola | nucleus | 23.92 | 23.31 |
| CDY45835 | Canola | nucleus | 30.26 | 23.18 |
| CDX71994 | Canola | nucleus | 23.92 | 22.99 |
| CDY28061 | Canola | nucleus | 29.39 | 22.52 |
| CDX81575 | Canola | nucleus | 30.55 | 22.32 |
| CDY51061 | Canola | nucleus | 27.09 | 21.71 |
| CDY35923 | Canola | nucleus, plastid | 27.95 | 21.65 |
| CDX86297 | Canola | nucleus | 28.82 | 20.41 |
| CDX85347 | Canola | nucleus | 28.82 | 20.37 |
| CDY47665 | Canola | cytosol | 14.12 | 19.07 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | GO:A0A078IWS6 | UniProt:A0A078IWS6 | EnsemblPlants:CDY53834 |
| ProteinID:CDY53834 | ProteinID:CDY53834.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00011519001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EEEC6E |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
BnaA09g57260DBnaA09g57260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IWS6]
Coordinates
chrLK033241:-:54679..56350
Molecular Weight (calculated)
38328.9 Da
IEP (calculated)
5.840
GRAVY (calculated)
-0.709
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGESNNEGE MGLNHGHDPS MPLYAKTDPY FSSSDWDPVV NGGGFSSSHY PSVVMDNPGM SCFTHYQSGS GYPDMPASLL PFGDCGGGGE SVGRLMRAGE
101: SHDQVLDDGV LGASPTRKRR QAEAESQRNK KAVEEYQEDT QRGSDQSQKK HKDGQNKESS QSEEAPKENY IHMRARRGQA TNSHSLAERV RREKISERMR
201: LLQELVPGCN KITGKAVMLD EIINYVQSLQ QQVEFLSMKL ATVNPEVNID IDRIIAKDLL QPRDRNTPTL GLSPFTSFHG TIPNISTTAN PQYNSLPQTT
301: LESELQSLYQ MGFVSNPSTM SSFSPNNGKL KATQTCFCLF PFLCCLD
101: SHDQVLDDGV LGASPTRKRR QAEAESQRNK KAVEEYQEDT QRGSDQSQKK HKDGQNKESS QSEEAPKENY IHMRARRGQA TNSHSLAERV RREKISERMR
201: LLQELVPGCN KITGKAVMLD EIINYVQSLQ QQVEFLSMKL ATVNPEVNID IDRIIAKDLL QPRDRNTPTL GLSPFTSFHG TIPNISTTAN PQYNSLPQTT
301: LESELQSLYQ MGFVSNPSTM SSFSPNNGKL KATQTCFCLF PFLCCLD
001: MGGESNEGGE MGFKHGDDES GGISRVGITS MPLYAKADPF FSSADWDPVV NAAAAGFSSS HYHPSMAMDN PGMSCFSHYQ PGSVSGFAAD MPASLLPFGD
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
Arabidopsis Description
BHLH74Transcription factor bHLH74 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKN9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.