Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031700.1-P | Field mustard | nucleus | 75.14 | 84.1 |
| CDY31048 | Canola | nucleus | 72.13 | 84.08 |
| CDY22605 | Canola | nucleus | 80.05 | 83.0 |
| Bra018461.1-P | Field mustard | nucleus | 72.68 | 82.61 |
| CDY53834 | Canola | nucleus | 77.05 | 81.27 |
| CDY20659 | Canola | nucleus | 73.22 | 80.48 |
| Solyc04g077480.2.1 | Tomato | nucleus | 44.26 | 42.41 |
| VIT_18s0001g08600.t01 | Wine grape | nucleus | 48.91 | 41.63 |
| PGSC0003DMT400012591 | Potato | nucleus | 43.44 | 41.62 |
| KRH52141 | Soybean | nucleus | 33.61 | 41.14 |
| KRH15460 | Soybean | nucleus | 46.72 | 39.86 |
| KRG88634 | Soybean | nucleus, plastid | 46.72 | 39.31 |
| Os03t0728900-00 | Rice | cytosol, nucleus | 28.96 | 39.26 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 24.04 | 38.94 |
| KRH61450 | Soybean | nucleus | 39.89 | 38.83 |
| TraesCS4D01G058900.1 | Wheat | nucleus | 32.24 | 37.34 |
| OQU91059 | Sorghum | nucleus | 31.69 | 36.83 |
| TraesCS4A01G255800.3 | Wheat | nucleus | 32.24 | 36.31 |
| TraesCS4B01G059000.1 | Wheat | nucleus | 31.97 | 36.22 |
| Zm00001d033870_P001 | Maize | nucleus | 31.42 | 35.6 |
| HORVU4Hr1G009970.28 | Barley | nucleus | 31.42 | 35.6 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.32 | 35.34 |
| AT5G50915.2 | Thale cress | nucleus | 27.32 | 34.97 |
| AT5G62610.2 | Thale cress | nucleus | 22.68 | 29.54 |
| AT1G26260.1 | Thale cress | nucleus | 31.15 | 29.23 |
| AT3G23690.1 | Thale cress | nucleus | 29.51 | 29.11 |
| AT4G34530.1 | Thale cress | nucleus | 25.96 | 28.36 |
| AT2G42300.1 | Thale cress | nucleus | 24.32 | 27.22 |
| Zm00001d013357_P001 | Maize | nucleus | 25.68 | 27.01 |
| AT1G68920.1 | Thale cress | nucleus | 33.06 | 24.9 |
| AT3G07340.1 | Thale cress | nucleus | 30.33 | 24.34 |
| AT1G59640.2 | Thale cress | nucleus | 22.4 | 23.91 |
| AT3G57800.1 | Thale cress | nucleus | 25.41 | 21.83 |
| AT5G48560.1 | Thale cress | nucleus | 29.51 | 21.69 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | EntrezGene:837549 | ProteinID:AAC34336.1 | ProteinID:AEE28544.1 |
| EMBL:AF488606 | EMBL:AK221806 | EMBL:AK229309 | EMBL:AK230347 | ProteinID:ANM58801.1 | ArrayExpress:AT1G10120 |
| EnsemblPlantsGene:AT1G10120 | RefSeq:AT1G10120 | TAIR:AT1G10120 | RefSeq:AT1G10120-TAIR-G | EnsemblPlants:AT1G10120.1 | TAIR:AT1G10120.1 |
| Unigene:At.43391 | EMBL:BT012655 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009628 | GO:GO:0009637 | GO:GO:0009987 | GO:GO:0040007 | GO:GO:0040008 | GO:GO:0046983 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | RefSeq:NP_001321212.1 | RefSeq:NP_172483.4 | PFAM:PF00010 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | UniProt:Q6NKN9 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0000196C02 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
BHLH74Transcription factor bHLH74 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKN9]
Coordinates
chr1:-:3304039..3306956
Molecular Weight (calculated)
40153.9 Da
IEP (calculated)
5.790
GRAVY (calculated)
-0.710
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGESNEGGE MGFKHGDDES GGISRVGITS MPLYAKADPF FSSADWDPVV NAAAAGFSSS HYHPSMAMDN PGMSCFSHYQ PGSVSGFAAD MPASLLPFGD
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.