Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G058900.1 | Wheat | nucleus | 95.67 | 97.78 |
| TraesCS4A01G255800.3 | Wheat | nucleus | 96.9 | 96.31 |
| HORVU4Hr1G009970.28 | Barley | nucleus | 92.57 | 92.57 |
| OQU91059 | Sorghum | nucleus | 78.02 | 80.0 |
| Os03t0728900-00 | Rice | cytosol, nucleus | 65.63 | 78.52 |
| Zm00001d033870_P001 | Maize | nucleus | 77.09 | 77.09 |
| Zm00001d013357_P001 | Maize | nucleus | 67.18 | 62.36 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 30.03 | 42.92 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.03 | 34.28 |
| CDY31048 | Canola | nucleus | 33.13 | 34.08 |
| CDY20659 | Canola | nucleus | 33.75 | 32.73 |
| Bra018461.1-P | Field mustard | nucleus | 32.51 | 32.61 |
| Bra031700.1-P | Field mustard | nucleus | 32.82 | 32.42 |
| AT1G10120.1 | Thale cress | nucleus | 36.22 | 31.97 |
| CDY22605 | Canola | nucleus | 34.67 | 31.73 |
| CDY63738 | Canola | nucleus | 33.44 | 31.58 |
| CDY53834 | Canola | nucleus | 33.75 | 31.41 |
| Bra019962.1-P | Field mustard | nucleus | 32.51 | 30.97 |
| TraesCS5B01G457600.1 | Wheat | nucleus, plastid | 22.91 | 29.13 |
| Solyc04g077480.2.1 | Tomato | nucleus | 34.06 | 28.8 |
| PGSC0003DMT400012591 | Potato | nucleus | 33.44 | 28.27 |
| KRH52141 | Soybean | nucleus | 26.01 | 28.09 |
| KRH61450 | Soybean | nucleus | 31.89 | 27.39 |
| CDY57925 | Canola | nucleus | 33.13 | 26.88 |
| TraesCS5B01G292100.1 | Wheat | nucleus | 22.6 | 26.45 |
| VIT_18s0001g08600.t01 | Wine grape | nucleus | 34.37 | 25.81 |
| TraesCS7B01G152800.1 | Wheat | nucleus | 30.65 | 25.71 |
| KRH15460 | Soybean | nucleus | 34.06 | 25.64 |
| TraesCS7B01G161700.3 | Wheat | nucleus, plastid | 26.32 | 25.37 |
| KRG88634 | Soybean | nucleus, plastid | 34.06 | 25.29 |
| TraesCS5B01G278600.1 | Wheat | nucleus | 29.1 | 25.2 |
| TraesCS6B01G300400.1 | Wheat | nucleus | 26.93 | 24.79 |
| TraesCS5B01G248600.1 | Wheat | nucleus | 31.58 | 24.06 |
| TraesCS3B01G457400.1 | Wheat | nucleus | 35.29 | 24.05 |
| TraesCS2B01G293300.1 | Wheat | nucleus | 30.96 | 23.87 |
| TraesCS7B01G303300.1 | Wheat | nucleus | 22.6 | 23.25 |
| TraesCS7B01G118800.1 | Wheat | nucleus | 31.27 | 22.95 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008150 | GO:GO:0009628 |
| GO:GO:0009637 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF182 | SMART:SM00353 | SUPFAM:SSF47459 | EnsemblPlantsGene:TraesCS4B01G059000 |
| EnsemblPlants:TraesCS4B01G059000.1 | InterPro:bHLH_dom | TIGR:cd00083 | : | : | : |
Description
No Description!
Coordinates
chr4B:-:49758607..49760300
Molecular Weight (calculated)
35725.1 Da
IEP (calculated)
6.606
GRAVY (calculated)
-0.727
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSGQQSDQG PAANSGKEFL EGNWGSVAMH QKMGYDSAAY GFQAYGMELE ERPGMYRSSA GTFSQNIQMS DEHSGGMKKR KGTDDCIALL NPSASSKNVG
101: DQQTEVSSQP ERNSAERDNR KISPKTQSKE DSSDGDGTRE NYVHFRAKRG QATNSHSLAE RLRRKKISER MKLLQDLVPG CNKITGKAVM LDEIINYVQS
201: LQRQVEFLSM KLATVNPELG FDIEQILSKQ VMLSQDRRLG FYGADPGSSA LIAHFNQGMM HPDMMCNASN PAGALHGTIH DISMMNQMPE MWETLQNIPH
301: MNFNPAVAAD SSTNNAGPMK IEQ
101: DQQTEVSSQP ERNSAERDNR KISPKTQSKE DSSDGDGTRE NYVHFRAKRG QATNSHSLAE RLRRKKISER MKLLQDLVPG CNKITGKAVM LDEIINYVQS
201: LQRQVEFLSM KLATVNPELG FDIEQILSKQ VMLSQDRRLG FYGADPGSSA LIAHFNQGMM HPDMMCNASN PAGALHGTIH DISMMNQMPE MWETLQNIPH
301: MNFNPAVAAD SSTNNAGPMK IEQ
001: MGGESNEGGE MGFKHGDDES GGISRVGITS MPLYAKADPF FSSADWDPVV NAAAAGFSSS HYHPSMAMDN PGMSCFSHYQ PGSVSGFAAD MPASLLPFGD
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
Arabidopsis Description
BHLH74Transcription factor bHLH74 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKN9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.