Factsheet for TraesCS7B01G152800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G257000.2	Wheat	nucleus	97.66	97.16
TraesCS7A01G256200.3	Wheat	nucleus	88.31	85.64
HORVU7Hr1G052870.23	Barley	nucleus	85.71	83.97
EES15330	Sorghum	nucleus	79.48	77.08
Os08t0524800-01	Rice	nucleus	80.0	76.05
Zm00001d031561_P002	Maize	nucleus	72.47	71.36
TraesCS5B01G278600.1	Wheat	nucleus	52.47	54.16
TraesCS5B01G457600.1	Wheat	nucleus, plastid	21.82	33.07
TraesCS5B01G292100.1	Wheat	nucleus	22.86	31.88
TraesCS4B01G059000.1	Wheat	nucleus	25.71	30.65
TraesCS6B01G300400.1	Wheat	nucleus	27.01	29.63
TraesCS5B01G248600.1	Wheat	nucleus	31.95	29.01
TraesCS7B01G161700.3	Wheat	nucleus, plastid	24.94	28.66
TraesCS7B01G303300.1	Wheat	nucleus	22.86	28.03
Solyc09g057710.2.1	Tomato	nucleus	34.03	27.64
TraesCS3B01G457400.1	Wheat	nucleus	33.51	27.22
PGSC0003DMT400053639	Potato	nucleus	33.77	26.42
GSMUA_Achr10P...	Banana	nucleus	25.97	23.64
TraesCS2B01G293300.1	Wheat	nucleus	25.45	23.39
TraesCS7B01G118800.1	Wheat	nucleus	26.23	22.95
GSMUA_Achr7P22770_001	Banana	nucleus	25.71	22.4
GSMUA_Achr4P16120_001	Banana	nucleus	25.45	21.44
GSMUA_Achr7P02770_001	Banana	nucleus	26.23	20.7

Protein Annotations

EnsemblPlants:TraesCS7B01G152800.1	EnsemblPlantsGene:TraesCS7B01G152800	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR12565
PANTHER:PTHR12565:SF169	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
TIGR:cd00083	MapMan:15.5.32	MapMan:26.1.2.1.2	:	:	:

Description

No Description!

Coordinates

chr7B:-:203027646..203029886

Molecular Weight (calculated)

41370.3 Da

IEP (calculated)

6.268

GRAVY (calculated)

-0.577

Length

385 amino acids

Sequence
(BLAST)

001: MEGTAGGGSG DYITSLLTSS PMLDFGVLDG AVAAGGNCLE KFCGDPGFAE RAARLSSFNG QHFTPGLFGM PPPAPGAGNG EFGGSREASS VSDPASAMKD
101: ANAKKRKAPA AKGKAKEPSL STSCQVGEQK EADVKRCRTG DAEKKVKPKA EQAGSDSSVE DGEQRKGKGK NAKPVEPPKD YVHVRARRGQ ATDSHSLAER
201: VRRERISQRM KFLQDLVPGC NKVIGKALML DEIINYVQSL QRQVEFLSMK LATVNPLDFS NLPTLLHKDM YGPSASSVFS LESSSSAFPF SDQGDVFQSF
301: LPSSMESQCT LNQLDLALSQ ATNAAQYAFQ DGTATASTNL QQQRNFWEDD LQSVFHVDNR QSQDNGVSAE SFHGDLQTGQ MKMEF

Best Arabidopsis Sequence Match ( AT1G68920.3 )
(BLAST)

001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP

Arabidopsis Description

BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.