Factsheet for TraesCS7D01G257000.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G152800.1	Wheat	nucleus	97.16	97.66
TraesCS7A01G256200.3	Wheat	nucleus	88.37	86.15
HORVU7Hr1G052870.23	Barley	nucleus	86.05	84.73
Os08t0524800-01	Rice	nucleus	81.14	77.53
EES15330	Sorghum	nucleus	79.07	77.08
Zm00001d031561_P002	Maize	nucleus	72.35	71.61
TraesCS5D01G286300.5	Wheat	nucleus	52.97	54.67
TraesCS5D01G459800.1	Wheat	nucleus, plastid	21.96	33.73
TraesCS5D01G300100.1	Wheat	nucleus	23.0	32.25
TraesCS4D01G058900.1	Wheat	nucleus	25.84	31.65
TraesCS5D01G258300.1	Wheat	nucleus	31.78	29.01
TraesCS6D01G253000.1	Wheat	nucleus	26.36	28.81
TraesCS7D01G264600.3	Wheat	nucleus	24.81	28.66
Solyc09g057710.2.1	Tomato	nucleus	33.85	27.64
TraesCS7D01G397300.1	Wheat	nucleus, plastid	22.48	27.53
TraesCS3D01G417300.2	Wheat	nucleus	33.59	27.14
PGSC0003DMT400053639	Potato	nucleus	33.59	26.42
GSMUA_Achr10P...	Banana	nucleus	26.1	23.88
TraesCS2D01G274600.1	Wheat	nucleus	24.81	23.41
TraesCS7D01G213500.1	Wheat	nucleus	26.1	22.95
GSMUA_Achr7P22770_001	Banana	nucleus	25.84	22.62
GSMUA_Achr4P16120_001	Banana	nucleus	25.58	21.66
GSMUA_Achr7P02770_001	Banana	nucleus	26.36	20.9

Protein Annotations

EnsemblPlants:TraesCS7D01G257000.2	EnsemblPlantsGene:TraesCS7D01G257000	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR12565
PANTHER:PTHR12565:SF169	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
TIGR:cd00083	MapMan:15.5.32	MapMan:26.1.2.1.2	:	:	:

Description

No Description!

Coordinates

chr7D:-:232407566..232409502

Molecular Weight (calculated)

41469.4 Da

IEP (calculated)

6.268

GRAVY (calculated)

-0.611

Length

387 amino acids

Sequence
(BLAST)

001: MDGRAGGGGS GDYISSLLTS SPMLDFGVLD GAVAAGGDCL EKFCGDPGFA ERAARLSSFN GQHFTPGLFG MPPPAPGAGN GEFGGSREAS SVSDPASAMK
101: DANAKKRKAP AGKGKAKEPS LSTSCQVGEQ KESDGKRCRT GDAEKKVKPK AEQAGSDSSV EDGEQRKGGK GKNAKPVEPP KDYVHVRARR GQATDSHSLA
201: ERVRRERISQ RMKFLQDLVP GCNKVIGKAL MLDEIINYVQ SLQRQVEFLS MKLATVNPLD FSNLPTLLHK DMYGPSASSV FSLESSSSAF PFSDQGDVFQ
301: SFLPNSMESQ CTLNQLDLAL SQATNAAQYA FQDGTATAST NLQQQRNFWE DDLQSVFHVD NRQSQDNGVS AESFHGDLQA GQMKMEF

Best Arabidopsis Sequence Match ( AT5G48560.1 )
(BLAST)

001: MDNELFMNTE FPPPPEMATH FEHQQSSSSA MMLNWALMDP NPHQDSSFLW EKSTEQQQQQ SIFDSALSSL VSSPTPSNSN FSGGGGDGFL IRELIGKLGN
101: IGNNNNNSGE IYGTPMSRSA SCYATPMSSP PPPTNSNSQM MMNRTTPLTE FSADPGFAER AARFSCFGSR SFNGRTNTNL PINNGNNMVN NSGKLTRVSS
201: TPALKALVSP EVTPGGEFSR KRKSVPKGKS KENPISTASP SPSFSKTAEK NGGKGGSKSS EEKGGKRRRE EEDDEEEEGE GEGNKSNNTK PPEPPKDYIH
301: VRARRGQATD SHSLAERVRR EKIGERMKLL QDLVPGCNKV TGKALMLDEI INYVQSLQRQ VEFLSMKLSS VNDTRLDFNV DALVSKDVMI PSSNNRLHEE
401: GLQSKSSSHH HQQQLNIYNN NSQLLPNISS NNMMLQSPMN SLETSTLARS FTHLPTLTQF TDSISQYQMF SEEDLQSIVG MGVAENPNNE SQHMKIEL

Arabidopsis Description

BHLH78Transcription factor bHLH78 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJL4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.