Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G403900.1 | Wheat | cytosol | 48.1 | 98.7 |
| TraesCS7B01G303300.1 | Wheat | nucleus | 95.25 | 95.86 |
| Os06t0613500-01 | Rice | cytosol, nucleus | 49.68 | 88.2 |
| HORVU7Hr1G094690.1 | Barley | plastid | 64.24 | 82.19 |
| Zm00001d046759_P001 | Maize | plastid | 75.63 | 67.13 |
| Zm00001d036807_P001 | Maize | nucleus | 76.58 | 65.41 |
| OQU76702 | Sorghum | nucleus | 78.8 | 60.73 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 50.32 | 43.56 |
| GSMUA_Achr4P19330_001 | Banana | nucleus | 52.53 | 42.89 |
| CDX98249 | Canola | nucleus | 37.66 | 42.5 |
| GSMUA_Achr7P06330_001 | Banana | nucleus | 48.73 | 42.08 |
| CDX67710 | Canola | nucleus | 42.41 | 41.61 |
| Bra003300.1-P | Field mustard | nucleus | 42.41 | 41.61 |
| VIT_08s0007g07870.t01 | Wine grape | nucleus | 47.15 | 40.93 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 17.72 | 40.58 |
| CDX88966 | Canola | nucleus | 41.77 | 39.76 |
| AT2G42300.1 | Thale cress | nucleus | 41.14 | 39.76 |
| PGSC0003DMT400021130 | Potato | nucleus | 45.25 | 39.72 |
| CDX79883 | Canola | nucleus | 37.66 | 39.4 |
| CDY06074 | Canola | nucleus | 44.3 | 39.33 |
| KRH71879 | Soybean | nucleus | 43.99 | 39.27 |
| Bra007358.1-P | Field mustard | nucleus | 44.3 | 39.11 |
| Bra004679.1-P | Field mustard | nucleus | 37.34 | 39.07 |
| Solyc10g079070.1.1 | Tomato | nucleus | 44.62 | 39.06 |
| Bra014603.1-P | Field mustard | nucleus | 42.72 | 39.02 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 35.76 | 38.97 |
| CDY53497 | Canola | nucleus | 37.97 | 38.84 |
| KRH33022 | Soybean | nucleus | 43.67 | 38.66 |
| CDX71994 | Canola | nucleus | 43.99 | 38.5 |
| KRG95332 | Soybean | nucleus | 44.3 | 38.25 |
| KRH67006 | Soybean | nucleus | 43.99 | 34.75 |
| CDY47665 | Canola | cytosol | 27.53 | 33.85 |
| AT3G57800.1 | Thale cress | nucleus | 43.99 | 32.63 |
| TraesCS5D01G459800.1 | Wheat | nucleus, plastid | 20.89 | 26.19 |
| TraesCS5D01G300100.1 | Wheat | nucleus | 21.52 | 24.64 |
| TraesCS6D01G253000.1 | Wheat | nucleus | 27.53 | 24.58 |
| TraesCS4D01G058900.1 | Wheat | nucleus | 23.1 | 23.1 |
| TraesCS7D01G257000.2 | Wheat | nucleus | 27.53 | 22.48 |
| TraesCS5D01G286300.5 | Wheat | nucleus | 25.95 | 21.87 |
| TraesCS7D01G264600.3 | Wheat | nucleus | 22.78 | 21.49 |
| TraesCS5D01G258300.1 | Wheat | nucleus | 28.16 | 20.99 |
| TraesCS2D01G274600.1 | Wheat | nucleus | 25.95 | 20.0 |
| TraesCS7D01G213500.1 | Wheat | nucleus | 26.27 | 18.86 |
| TraesCS3D01G417300.2 | Wheat | nucleus | 26.9 | 17.75 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G397300.1 | EnsemblPlantsGene:TraesCS7D01G397300 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF112 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 |
| TIGR:cd00083 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : | : | : |
Description
No Description!
Coordinates
chr7D:+:511990555..511998848
Molecular Weight (calculated)
33154.2 Da
IEP (calculated)
8.494
GRAVY (calculated)
-0.452
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MRHPSPPPEL PAAGGEIQAM APASAAGSSS TGGSTGGSFT ALLGLPTSQA IELLLPGAAP APAPAFPSDP HLVDRAARFS AFASPSPSPT PPPPASAGKR
101: KADPASKGKV AKKGKTTAAG GEEKDSGEDE KPAYVHVRAR RGQATDSHSL AERARREKIN ARMELLKELV PGCSKVSGTA LVLEEIINHV QSLQRQVEYL
201: SMRLAAVNPR VDFGGLDNLL GTECGRITGL NCKSGMDLEQ VSWPDMGVHG ARNLAQLQQQ FWHGDLVHPQ QAASPWEKRG DVQPPVFSNT SSSLFGYDLA
301: SSGPQQPPTS KLKTEL
101: KADPASKGKV AKKGKTTAAG GEEKDSGEDE KPAYVHVRAR RGQATDSHSL AERARREKIN ARMELLKELV PGCSKVSGTA LVLEEIINHV QSLQRQVEYL
201: SMRLAAVNPR VDFGGLDNLL GTECGRITGL NCKSGMDLEQ VSWPDMGVHG ARNLAQLQQQ FWHGDLVHPQ QAASPWEKRG DVQPPVFSNT SSSLFGYDLA
301: SSGPQQPPTS KLKTEL
001: MDLTQGFRAR SGVVGPVAGL ESLNFSDEFR HLVTTMPPET TGGSFTALLE MPVTQAMELL HFPDSSSSQA RTVTSGDISP TTLHPFGALT FPSNSLLLDR
101: AARFSVIATE QNGNFSGETA NSLPSNPGAN LDRVKAEPAE TDSMVENQNQ SYSSGKRKER EKKVKSSTKK NKSSVESDKL PYVHVRARRG QATDNHSLAE
201: RARREKINAR MKLLQELVPG CDKIQGTALV LDEIINHVQT LQRQVEMLSM RLAAVNPRID FNLDSILASE NGSLMDGSFN AESYHQLQQW PFDGYHQPEW
301: GREEDHHQAN FSMGSATLHP NQVKMEL
101: AARFSVIATE QNGNFSGETA NSLPSNPGAN LDRVKAEPAE TDSMVENQNQ SYSSGKRKER EKKVKSSTKK NKSSVESDKL PYVHVRARRG QATDNHSLAE
201: RARREKINAR MKLLQELVPG CDKIQGTALV LDEIINHVQT LQRQVEMLSM RLAAVNPRID FNLDSILASE NGSLMDGSFN AESYHQLQQW PFDGYHQPEW
301: GREEDHHQAN FSMGSATLHP NQVKMEL
Arabidopsis Description
BHLH48Transcription factor bHLH48 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ02]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.