Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G403900.1 | Wheat | cytosol | 75.84 | 87.66 |
| HORVU7Hr1G094690.1 | Barley | plastid | 88.76 | 63.97 |
| TraesCS7B01G303300.1 | Wheat | nucleus | 89.33 | 50.64 |
| TraesCS7D01G397300.1 | Wheat | nucleus, plastid | 88.2 | 49.68 |
| Zm00001d046759_P001 | Maize | plastid | 84.27 | 42.13 |
| Zm00001d036807_P001 | Maize | nucleus | 84.83 | 40.81 |
| OQU76702 | Sorghum | nucleus | 84.27 | 36.59 |
| Os07t0193800-01 | Rice | endoplasmic reticulum | 33.71 | 28.85 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 56.18 | 27.4 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 44.38 | 27.24 |
| GSMUA_Achr4P19330_001 | Banana | nucleus | 58.99 | 27.13 |
| GSMUA_Achr7P06330_001 | Banana | nucleus | 53.93 | 26.23 |
| VIT_08s0007g07870.t01 | Wine grape | nucleus | 52.25 | 25.55 |
| PGSC0003DMT400021130 | Potato | nucleus | 50.56 | 25.0 |
| KRH71879 | Soybean | nucleus | 49.44 | 24.86 |
| Solyc10g079070.1.1 | Tomato | nucleus | 49.44 | 24.38 |
| KRH33022 | Soybean | nucleus | 48.88 | 24.37 |
| KRG95332 | Soybean | nucleus | 50.0 | 24.32 |
| Os04t0350700-01 | Rice | nucleus | 34.27 | 23.19 |
| Os03t0802900-01 | Rice | nucleus | 34.27 | 23.02 |
| Os03t0728900-00 | Rice | cytosol, nucleus | 34.83 | 22.96 |
| KRH67006 | Soybean | nucleus | 49.44 | 22.0 |
| Os09t0510500-01 | Rice | nucleus | 32.02 | 20.21 |
| Os02t0705500-01 | Rice | nucleus | 37.08 | 18.28 |
| Os09t0501600-01 | Rice | nucleus | 36.52 | 17.76 |
| Os08t0536800-01 | Rice | cytosol, nucleus, plastid | 30.34 | 17.48 |
| Os05t0103000-01 | Rice | nucleus | 31.46 | 16.52 |
| Os08t0524800-01 | Rice | nucleus | 37.08 | 16.3 |
| Os11t0442500-00 | Rice | nucleus | 33.71 | 16.0 |
| Os09t0474100-01 | Rice | nucleus | 37.08 | 15.42 |
| Os06t0275600-01 | Rice | cytosol, nucleus | 35.96 | 14.65 |
| Os01t0915600-01 | Rice | nucleus | 39.33 | 14.55 |
| Os08t0487700-00 | Rice | nucleus | 25.28 | 13.12 |
| Os09t0474051-01 | Rice | plastid | 14.04 | 4.27 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | ProteinID:BAF19985.2 | ProteinID:BAS98615.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlantsGene:Os06g0613500 | EnsemblPlants:Os06t0613500-01 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF112 | UniProt:Q0DAY8 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0001B65C70 | InterPro:bHLH_dom | : | : | : |
Description
basic helix-loop-helix protein 095Similar to Transcription factor (Fragment). (Os06t0613500-01)
Coordinates
chr6:-:24522241..24527832
Molecular Weight (calculated)
19775.4 Da
IEP (calculated)
7.630
GRAVY (calculated)
-0.528
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: ARRGQATDSH SLAERARREK INARMELLKE LVPGCSKVSG TALVLDEIIN HVQSLQRQVE YLSMRLAAVN PRVDFGGLDN FLTTECGRIT GLNYKNGMDL
101: EQVTWPDMGV HGARNLMQLQ QQFWHGDLAH PLQPPSQWEK RTDTNPPVFS NSSSSLFGYD LASSGAPAQT GNKLKTEL
101: EQVTWPDMGV HGARNLMQLQ QQFWHGDLAH PLQPPSQWEK RTDTNPPVFS NSSSSLFGYD LASSGAPAQT GNKLKTEL
001: MDLTGGFGAR SGGVGPCREP IGLESLHLGD EFRQLVTTLP PENPGGSFTA LLELPPTQAV ELLHFTDSSS SQQAAVTGIG GEIPPPLHSF GGTLAFPSNS
101: VLMERAARFS VIATEQQNGN ISGETPTSSV PSNSSANLDR VKTEPAETDS SQRLISDSAI ENQIPCPNQN NRNGKRKDFE KKGKSSTKKN KSSEENEKLP
201: YVHVRARRGQ ATDSHSLAER ARREKINARM KLLQELVPGC DKIQGTALVL DEIINHVQSL QRQVEMLSMR LAAVNPRIDF NLDTILASEN GSLMDGSFNA
301: APMQLAWPQQ AIETEQSFHH RQLQQPPTQQ WPFDGLNQPV WGREEDQAHG NDNSNLMAVS ENVMVASANL HPNQVKMEL
101: VLMERAARFS VIATEQQNGN ISGETPTSSV PSNSSANLDR VKTEPAETDS SQRLISDSAI ENQIPCPNQN NRNGKRKDFE KKGKSSTKKN KSSEENEKLP
201: YVHVRARRGQ ATDSHSLAER ARREKINARM KLLQELVPGC DKIQGTALVL DEIINHVQSL QRQVEMLSMR LAAVNPRIDF NLDTILASEN GSLMDGSFNA
301: APMQLAWPQQ AIETEQSFHH RQLQQPPTQQ WPFDGLNQPV WGREEDQAHG NDNSNLMAVS ENVMVASANL HPNQVKMEL
Arabidopsis Description
BHLH60Transcription factor bHLH60 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAI1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.