Factsheet for Os09t0474100-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35834	Sorghum	nucleus	83.41	81.69
Zm00001d020826_P001	Maize	nucleus	80.84	79.72
TraesCS5A01G250600.1	Wheat	nucleus	78.04	78.59
TraesCS5D01G258300.1	Wheat	nucleus	77.8	78.54
TraesCS5B01G248600.1	Wheat	nucleus	77.8	78.54
Zm00001d005964_P002	Maize	nucleus	73.83	69.76
GSMUA_Achr6P36210_001	Banana	nucleus	30.37	47.27
VIT_01s0010g00740.t01	Wine grape	nucleus	44.16	40.3
Bra038336.1-P	Field mustard	plastid	33.18	38.9
GSMUA_Achr8P24490_001	Banana	nucleus	36.45	37.68
Os06t0613500-01	Rice	cytosol, nucleus	15.42	37.08
Os03t0728900-00	Rice	cytosol, nucleus	23.13	36.67
Os07t0193800-01	Rice	endoplasmic reticulum	17.52	36.06
Os06t0275600-01	Rice	cytosol, nucleus	36.22	35.47
Solyc05g010610.2.1	Tomato	nucleus	41.82	34.62
GSMUA_Achr9P18510_001	Banana	nucleus	25.23	34.62
KRH75189	Soybean	nucleus	44.39	34.55
CDY33568	Canola	nucleus	38.55	34.23
Bra004348.1-P	Field mustard	nucleus	37.85	34.03
CDY45835	Canola	nucleus	35.98	34.0
GSMUA_Achr9P28060_001	Banana	nucleus	24.3	33.99
KRH71031	Soybean	nucleus	43.69	33.94
PGSC0003DMT400050585	Potato	nucleus	40.89	33.65
CDX95974	Canola	nucleus	37.62	33.61
Os04t0350700-01	Rice	nucleus	20.33	33.08
Os09t0501600-01	Rice	nucleus	28.27	33.06
CDX81575	Canola	nucleus	36.22	32.63
PGSC0003DMT400004830	Potato	nucleus	35.28	32.61
AT1G68920.1	Thale cress	nucleus	36.92	32.51
Os03t0802900-01	Rice	nucleus	19.86	32.08
PGSC0003DMT400022704	Potato	nucleus	39.72	31.78
Os08t0487700-00	Rice	nucleus	25.0	31.2
Solyc01g010130.2.1	Tomato	nucleus	39.02	31.1
Os08t0524800-01	Rice	nucleus	28.5	30.12
GSMUA_Achr3P10600_001	Banana	nucleus	31.07	28.85
Solyc04g005220.1.1	Tomato	nucleus	28.04	28.64
Os11t0442500-00	Rice	nucleus	24.07	27.47
Os09t0510500-01	Rice	nucleus	17.76	26.95
Os01t0915600-01	Rice	nucleus	29.67	26.4
Os02t0705500-01	Rice	nucleus	22.2	26.32
Os05t0103000-01	Rice	nucleus	20.33	25.66
Os08t0536800-01	Rice	cytosol, nucleus, plastid	17.52	24.27
Os09t0474051-01	Rice	plastid	10.51	7.69

Protein Annotations

MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EntrezGene:4347355	EMBL:AK121418	ProteinID:BAD34345.1
ProteinID:BAF25369.1	ProteinID:BAT08592.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	EMBL:HQ858863
InterPro:IPR011598	InterPro:IPR036638	EnsemblPlantsGene:Os09g0474100	EnsemblPlants:Os09t0474100-01	PFAM:PF00010	PFscan:PS50888
PANTHER:PTHR12565	PANTHER:PTHR12565:SF182	UniProt:Q69JJ6	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI00003FF59F
RefSeq:XP_015612420.1	InterPro:bHLH_dom	SEG:seg	:	:	:

Description

basic helix-loop-helix protein 085Similar to TA1 protein (Fragment). (Os09t0474100-01)

Coordinates

chr9:+:18141491..18144511

Molecular Weight (calculated)

45291.0 Da

IEP (calculated)

6.193

GRAVY (calculated)

-0.507

Length

428 amino acids

Sequence
(BLAST)

001: MDMSESSEKG MESNASSGPG NGIPVEWQSQ FSSAFACQPS VAAQHQQHAM MDSFAAASAG LWASSDVVSA MSSAAPPRGA GFLAPVPGFL QQGLGHFPVD
101: SGFIERAARS TCFGGGMMAG GPYGAADQAM GDAFGGTAEG LMDHHRNVGN DKAEEFAGNG HDEVPSSEVA GGDCSSKGSD SKKRRRPNEV MGTDQVHSSN
201: LPSDSANESV HSKDKGEESS PATTNGGKSK GKGAKETSES QKEEYIHVRA RRGQATNSHS LAERLRREKI SERMKLLQDL VPGCSKVTGK AVMLDEIINY
301: VQSLQRQVEF LSMKLATVNP RLDLNIEGLL SKDLLRFPGV PSSSIGFSPE MMHPQLQLSQ PGLIHGGTAG MANPDVFRRI IQAQLGAKDG SQMPHSLNGS
401: FSDVSQMAYP SLGSQDLSIR PSQDGFQM

Best Arabidopsis Sequence Match ( AT1G68920.3 )
(BLAST)

001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP

Arabidopsis Description

BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.