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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G258300.1 Wheat nucleus 98.82 98.82
TraesCS5A01G250600.1 Wheat nucleus 98.82 98.59
Zm00001d020826_P001 Maize nucleus 79.72 77.88
Os09t0474100-01 Rice nucleus 78.54 77.8
KXG35834 Sorghum nucleus 79.95 77.57
Zm00001d005964_P002 Maize nucleus 71.93 67.33
GSMUA_Achr6P36210_001 Banana nucleus 29.95 46.18
Bra038336.1-P Field mustard plastid 33.25 38.63
VIT_01s0010g00740.t01 Wine grape nucleus 42.45 38.38
GSMUA_Achr8P24490_001 Banana nucleus 37.03 37.92
GSMUA_Achr9P28060_001 Banana nucleus 24.76 34.31
Solyc05g010610.2.1 Tomato nucleus 41.75 34.24
CDY33568 Canola nucleus 38.68 34.02
PGSC0003DMT400050585 Potato nucleus 41.51 33.85
Bra004348.1-P Field mustard nucleus 37.97 33.82
CDX95974 Canola nucleus 38.21 33.82
CDY45835 Canola nucleus 36.08 33.77
GSMUA_Achr9P18510_001 Banana nucleus 24.76 33.65
PGSC0003DMT400004830 Potato nucleus 35.85 32.83
KRH75189 Soybean nucleus 42.45 32.73
CDX81575 Canola nucleus 36.32 32.42
KRH71031 Soybean nucleus 41.75 32.12
TraesCS7B01G152800.1 Wheat nucleus 29.01 31.95
PGSC0003DMT400022704 Potato nucleus 40.09 31.78
AT1G68920.1 Thale cress nucleus 36.32 31.69
TraesCS4B01G059000.1 Wheat nucleus 24.06 31.58
Solyc01g010130.2.1 Tomato nucleus 39.86 31.47
TraesCS5B01G457600.1 Wheat nucleus, plastid 18.63 31.1
TraesCS5B01G278600.1 Wheat nucleus 27.12 30.83
TraesCS5B01G292100.1 Wheat nucleus 19.1 29.35
GSMUA_Achr3P10600_001 Banana nucleus 31.6 29.07
TraesCS7B01G303300.1 Wheat nucleus 21.23 28.66
Solyc04g005220.1.1 Tomato nucleus 27.59 27.92
TraesCS6B01G300400.1 Wheat nucleus 22.64 27.35
TraesCS7B01G118800.1 Wheat nucleus 27.59 26.59
TraesCS3B01G457400.1 Wheat nucleus 29.72 26.58
TraesCS7B01G161700.3 Wheat nucleus, plastid 20.05 25.37
TraesCS2B01G293300.1 Wheat nucleus 22.64 22.91
Protein Annotations
EnsemblPlants:TraesCS5B01G248600.1EnsemblPlantsGene:TraesCS5B01G248600Gene3D:4.10.280.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0046983InterPro:HLH_DNA-bd_sfInterPro:IPR011598InterPro:IPR036638InterPro:bHLH_domPANTHER:PTHR12565
PANTHER:PTHR12565:SF182PFAM:PF00010PFscan:PS50888SEG:segSMART:SM00353SUPFAM:SSF47459
TIGR:cd00083MapMan:15.5.32MapMan:26.1.2.1.2:::
Description
No Description!
Coordinates
chr5B:+:430740454..430742798
Molecular Weight (calculated)
44435.0 Da
IEP (calculated)
6.800
GRAVY (calculated)
-0.581
Length
424 amino acids
Sequence
(BLAST)
001: MDMNESSEKG MEGNGSSGPG GGIPVEWQSQ FSGGGFSAHQ HQQHPHMMDS FGSGMWSAAS QHGAGFLAPV PGFLPPPGLG GHFPVDSGFI ERAARSSCFV
101: GPGAGGGMMG AGAFGGAGDQ QMGSAFGEGY LDHRRKEGGD KAEPELAGSG GVPSSEAAGG DCSSKGSDSK KRRRPSEVMG GDQVQSSNVA ADSANESAQS
201: KDKGEESSPA TGTTTGGKSK GKGAKESSEK EDYIHVRARR GQATNSHSLA ERLRREKISE RMKLLQDLVP GCSKVTGKAV MLDEIINYVQ SLQRQVEFLS
301: MKLATVNPRL DLNIEGLLSK DLLRFPGVSS SSMGFSPEMM HPQLQLSQPG LMQGGAAAMA NSDVFRRIMQ AQLGAKDGSH SQMAHALNGP FSDHVAQMAY
401: PSMGSSHSHS QDLSIRPSQD AYQM
Best Arabidopsis Sequence Match ( AT1G68920.3 )
(BLAST)
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
Arabidopsis Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.