Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020826_P001 | Maize | nucleus | 92.68 | 93.32 |
| Os09t0474100-01 | Rice | nucleus | 81.69 | 83.41 |
| Zm00001d005964_P002 | Maize | nucleus | 84.67 | 81.68 |
| TraesCS5B01G248600.1 | Wheat | nucleus | 77.57 | 79.95 |
| TraesCS5D01G258300.1 | Wheat | nucleus | 77.57 | 79.95 |
| TraesCS5A01G250600.1 | Wheat | nucleus | 77.35 | 79.53 |
| GSMUA_Achr6P36210_001 | Banana | nucleus | 29.29 | 46.55 |
| VIT_01s0010g00740.t01 | Wine grape | nucleus | 42.79 | 39.87 |
| Bra038336.1-P | Field mustard | plastid | 32.49 | 38.9 |
| GSMUA_Achr8P24490_001 | Banana | nucleus | 35.93 | 37.92 |
| GSMUA_Achr9P28060_001 | Banana | nucleus | 24.71 | 35.29 |
| Solyc05g010610.2.1 | Tomato | nucleus | 41.65 | 35.2 |
| CDY45835 | Canola | nucleus | 36.16 | 34.88 |
| GSMUA_Achr9P18510_001 | Banana | nucleus | 24.71 | 34.62 |
| OQU91059 | Sorghum | nucleus | 24.94 | 34.6 |
| PGSC0003DMT400050585 | Potato | nucleus | 40.96 | 34.42 |
| CDY33568 | Canola | nucleus | 37.76 | 34.23 |
| Bra004348.1-P | Field mustard | nucleus | 37.07 | 34.03 |
| KRH75189 | Soybean | nucleus | 42.79 | 34.0 |
| OQU81018 | Sorghum | nucleus | 29.06 | 33.87 |
| CDX95974 | Canola | nucleus | 37.07 | 33.82 |
| KRH71031 | Soybean | nucleus | 42.33 | 33.58 |
| CDX81575 | Canola | nucleus | 36.38 | 33.47 |
| PGSC0003DMT400004830 | Potato | nucleus | 35.24 | 33.26 |
| EER90712 | Sorghum | nucleus | 18.99 | 32.81 |
| PGSC0003DMT400022704 | Potato | nucleus | 39.82 | 32.52 |
| OQU89735 | Sorghum | nucleus | 26.09 | 32.39 |
| AT1G68920.1 | Thale cress | nucleus | 35.93 | 32.3 |
| Solyc01g010130.2.1 | Tomato | nucleus | 39.36 | 32.03 |
| EES15330 | Sorghum | nucleus | 28.38 | 31.23 |
| EES14175 | Sorghum | nucleus | 20.14 | 30.03 |
| GSMUA_Achr3P10600_001 | Banana | nucleus | 31.12 | 29.5 |
| Solyc04g005220.1.1 | Tomato | nucleus | 27.92 | 29.12 |
| EER99171 | Sorghum | nucleus | 18.54 | 28.83 |
| EES04098 | Sorghum | nucleus | 30.66 | 27.69 |
| EES05656 | Sorghum | nucleus | 22.65 | 27.58 |
| OQU83382 | Sorghum | nucleus | 26.09 | 26.51 |
| OQU76702 | Sorghum | nucleus | 21.97 | 23.41 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | UniProt:A0A1B6QD47 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KXG35834 |
| ProteinID:KXG35834 | ProteinID:KXG35834.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF182 |
| SMART:SM00353 | EnsemblPlantsGene:SORBI_3002G235700 | SUPFAM:SSF47459 | UniParc:UPI0003C6B4BA | InterPro:bHLH_dom | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:+:62657766..62663108
Molecular Weight (calculated)
45829.8 Da
IEP (calculated)
6.251
GRAVY (calculated)
-0.473
Length
437 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMNESGEKG MEGNASSGAA GIPVEWQTQF SAAAFSCAPP QQQQVPMMDS AFASAAGLWA STSQAMALSD VGAMSAARGG GGFLAPVPGF LPQGLGHFPV
101: DSGFIERAAR ASCFGGGGGV MGATAGYGTA DHQTMNNAFS GSSEALLDHQ RKDGNDKGEP ELGRNGHDGV LSSEAAAGDC SSKGTSDSKK RRRPNEVMGG
201: DQVQSANLPA DSANESVHSK DKGEESSPAT TTGPGKSKGK GAKETSESQK EDYIHVRARR GQATNSHSLA ERLRREKISE RMKLLQDLVP GCSKVTGKAV
301: MLDEIINYVQ SLQRQVEFLS MKLATVNPRL DLNIEGLLSK DLLRFPGVPS SSLGFSPEMM HPQLQLSQPG LIQGGAAGMA NPDVFRRIMQ AQLSAKDGSQ
401: MSHALNGGSF SEVAQMAYPS LGSQDLSIRP SQDGFQM
101: DSGFIERAAR ASCFGGGGGV MGATAGYGTA DHQTMNNAFS GSSEALLDHQ RKDGNDKGEP ELGRNGHDGV LSSEAAAGDC SSKGTSDSKK RRRPNEVMGG
201: DQVQSANLPA DSANESVHSK DKGEESSPAT TTGPGKSKGK GAKETSESQK EDYIHVRARR GQATNSHSLA ERLRREKISE RMKLLQDLVP GCSKVTGKAV
301: MLDEIINYVQ SLQRQVEFLS MKLATVNPRL DLNIEGLLSK DLLRFPGVPS SSLGFSPEMM HPQLQLSQPG LIQGGAAGMA NPDVFRRIMQ AQLSAKDGSQ
401: MSHALNGGSF SEVAQMAYPS LGSQDLSIRP SQDGFQM
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
Arabidopsis Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.