Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d034503_P002 | Maize | nucleus | 92.49 | 91.76 |
| HORVU5Hr1G107520.2 | Barley | cytosol, nucleus | 61.66 | 75.36 |
| TraesCS5D01G459800.1 | Wheat | nucleus, plastid | 71.54 | 71.83 |
| Os03t0802900-01 | Rice | nucleus | 75.1 | 71.7 |
| TraesCS5B01G457600.1 | Wheat | nucleus, plastid | 70.75 | 70.47 |
| Solyc03g113560.2.1 | Tomato | cytosol | 27.67 | 68.63 |
| GSMUA_Achr9P11020_001 | Banana | nucleus | 56.13 | 55.04 |
| Solyc04g005130.2.1 | Tomato | nucleus | 47.43 | 52.86 |
| PGSC0003DMT400004855 | Potato | nucleus | 45.85 | 52.49 |
| KRH63442 | Soybean | nucleus | 47.83 | 49.79 |
| KRH56987 | Soybean | plastid | 43.87 | 49.55 |
| KRH69414 | Soybean | nucleus | 49.41 | 49.02 |
| KRH03393 | Soybean | nucleus | 44.27 | 48.91 |
| KRH69415 | Soybean | nucleus | 49.8 | 48.46 |
| VIT_17s0000g05370.t01 | Wine grape | nucleus | 54.15 | 48.24 |
| VIT_01s0026g01140.t01 | Wine grape | nucleus | 52.57 | 48.01 |
| KRH45811 | Soybean | nucleus | 51.78 | 47.99 |
| PGSC0003DMT400062844 | Potato | nucleus | 54.94 | 47.77 |
| KRH74729 | Soybean | nucleus | 49.8 | 47.73 |
| KRH54478 | Soybean | nucleus | 49.8 | 46.84 |
| PGSC0003DMT400058204 | Potato | nucleus | 49.41 | 46.3 |
| CDX93427 | Canola | nucleus | 48.62 | 45.9 |
| CDY37979 | Canola | nucleus | 48.22 | 45.86 |
| Solyc05g006650.2.1 | Tomato | nucleus | 49.01 | 45.59 |
| Bra019935.1-P | Field mustard | nucleus | 48.22 | 45.52 |
| GSMUA_Achr7P01750_001 | Banana | nucleus | 54.94 | 41.37 |
| GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 58.89 | 40.6 |
| AT5G62610.2 | Thale cress | nucleus | 45.06 | 40.57 |
| CDY61420 | Canola | extracellular | 21.74 | 40.44 |
| CDX87255 | Canola | nucleus, plastid | 43.87 | 39.64 |
| AT1G59640.2 | Thale cress | nucleus | 45.45 | 33.53 |
| EER99171 | Sorghum | nucleus | 29.25 | 26.33 |
| EES14175 | Sorghum | nucleus | 30.04 | 25.94 |
| OQU89735 | Sorghum | nucleus | 35.97 | 25.85 |
| OQU91059 | Sorghum | nucleus | 30.04 | 24.13 |
| EES05656 | Sorghum | nucleus | 33.99 | 23.96 |
| EES15330 | Sorghum | nucleus | 35.97 | 22.92 |
| OQU81018 | Sorghum | nucleus | 32.41 | 21.87 |
| OQU83382 | Sorghum | nucleus | 34.78 | 20.47 |
| KXG35834 | Sorghum | nucleus | 32.81 | 18.99 |
| OQU76702 | Sorghum | nucleus | 29.25 | 18.05 |
| EES04098 | Sorghum | nucleus | 33.99 | 17.77 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | EntrezGene:8081225 | UniProt:C5WX13 | EnsemblPlants:EER90712 |
| ProteinID:EER90712 | ProteinID:EER90712.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF305 | SMART:SM00353 | EnsemblPlantsGene:SORBI_3001G051300 | SUPFAM:SSF47459 | unigene:Sbi.20321 | UniParc:UPI0001A820FA |
| RefSeq:XP_002463714.1 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:3784895..3788443
Molecular Weight (calculated)
27217.6 Da
IEP (calculated)
7.556
GRAVY (calculated)
-0.706
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPSPAVAAE LWCPPHLAAG GGRQVEATSA LTEKSSGGRG GGSAVRRRPR ETLASEEDSS RIVSTSGGGQ DLTDPEAKRS KTNKSSNNNG SLRTEAETDP
101: RSAGKAVSKS LPAAEPPKQD YIHVRARRGQ ATDSHSLAER ARREKISERM KVLQDLVPGC NKVIGKASVL DEIINYIQSL QCQVEFLSMK LEAVNAHANQ
201: GVEAFPVKDY GAETYNTAPG LTFDTQTSRE YAQGTSTSEW LHMQIGSGYE RVS
101: RSAGKAVSKS LPAAEPPKQD YIHVRARRGQ ATDSHSLAER ARREKISERM KVLQDLVPGC NKVIGKASVL DEIINYIQSL QCQVEFLSMK LEAVNAHANQ
201: GVEAFPVKDY GAETYNTAPG LTFDTQTSRE YAQGTSTSEW LHMQIGSGYE RVS
001: MDPSGMMNEG GPFNLAEIWQ FPLNGVSTAG DSSRRSFVGP NQFGDADLTT AANGDPARMS HALSQAVIEG ISGAWKRRED ESKSAKIVST IGASEGENKR
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW LHMQIGSGGF ERTS
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW LHMQIGSGGF ERTS
Arabidopsis Description
BPETranscription factor BPE [Source:UniProtKB/Swiss-Prot;Acc:Q0JXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.