CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0487700-00	Rice	nucleus	38.93	42.57
GSMUA_Achr6P36210_001	Banana	nucleus	26.93	36.73
OQU91059	Sorghum	nucleus	27.73	33.02
EER90712	Sorghum	nucleus	21.87	32.41
GSMUA_Achr9P18510_001	Banana	nucleus	24.8	29.81
KXG35834	Sorghum	nucleus	33.87	29.06
GSMUA_Achr9P28060_001	Banana	nucleus	23.2	28.43
EES14175	Sorghum	nucleus	21.07	26.96
Bra038336.1-P	Field mustard	plastid	26.13	26.85
GSMUA_Achr8P24490_001	Banana	nucleus	29.6	26.81
EES15330	Sorghum	nucleus	28.0	26.45
OQU89735	Sorghum	nucleus	24.8	26.42
EER99171	Sorghum	nucleus	19.47	25.98
VIT_01s0010g00740.t01	Wine grape	nucleus	31.73	25.37
OQU83382	Sorghum	nucleus	27.47	23.95
EES05656	Sorghum	nucleus	22.67	23.68
AT1G68920.1	Thale cress	nucleus	30.67	23.66
GSMUA_Achr3P10600_001	Banana	nucleus	28.53	23.21
EES04098	Sorghum	nucleus	29.6	22.93
CDY33568	Canola	nucleus	29.33	22.82
CDY45835	Canola	nucleus	27.47	22.74
Solyc05g010610.2.1	Tomato	nucleus	31.2	22.63
CDX95974	Canola	nucleus	28.8	22.55
CDX81575	Canola	nucleus	28.53	22.53
PGSC0003DMT400004830	Potato	nucleus	27.73	22.46
KRH75189	Soybean	nucleus	32.8	22.36
PGSC0003DMT400050585	Potato	nucleus	30.93	22.31
Bra004348.1-P	Field mustard	nucleus	28.27	22.27
KRH71031	Soybean	nucleus	32.27	21.96
Solyc01g010130.2.1	Tomato	nucleus	29.07	20.3
PGSC0003DMT400022704	Potato	nucleus	28.53	20.0
OQU76702	Sorghum	nucleus	21.33	19.51
Solyc04g005220.1.1	Tomato	nucleus	20.8	18.62

Protein Annotations

MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	UniProt:A0A1Z5RB88	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	EnsemblPlants:OQU81018
ProteinID:OQU81018	ProteinID:OQU81018.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF182
SMART:SM00353	EnsemblPlantsGene:SORBI_3007G224200	SUPFAM:SSF47459	UniParc:UPI000B4249EC	InterPro:bHLH_dom	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:65171966..65174484

Molecular Weight (calculated)

39867.1 Da

IEP (calculated)

6.655

GRAVY (calculated)

-0.521

Length

375 amino acids

Sequence
(BLAST)

001: MDSFAWASVS QAAGLAGGSA VVSDGRSGGL LPPPMLGLQL PSPAALEHFM DPGLVQLAMR SSYITSEEHP LQATTGSGNG EPGFGGGGDA PSAEACSSRV
101: PEPDSNSNKR KRSNESQDVL GMIGTDQDQG MPSVDSSKER GEDDAKGKEE TPPATRKKKG KGASAADGES ESYIHVRARK GQATNRHSLA ERLRREKISE
201: RMKLLQDLVP GCTKVTGKAV MLDEIINYVQ SLQRQVEFLS MKLAAVNPQL GLNIKQLLSK DLFRAPSGPS SSSAHLGFSF SHEMMPILPP MSRSGVLPGG
301: VHGLANSDGF RTAMEEQLNG KDSIADHVSQ SQPLQQMPLT LDGSFHHNAA QTAVYGATVG PEHLGMRSDQ DRFHM

Best Arabidopsis Sequence Match ( AT1G26260.3 )
(BLAST)

001: MSDKDEFAAK KKDLVNTPVD LYPPENPMLG PSPMMDSFRE TLWHDGGFNV HTDADTSFRD STGLFLQDTQ IPSGSKLDNG PLTDASKLVK ERSINNVSED
101: SQSSGGNGHD DAKCGQTSSK GFSSKKRKRI GKDCEEEEDK KQKDEQSPTS NANKTNSEKQ PSDSLKDGYI HMRARRGQAT NSHSLAERVR REKISERMKF
201: LQDLVPGCDK VTGKAVMLDE IINYVQSLQC QIEFLSMKLS AVNPVLDFNL ESLLAKDALQ SSAPTFPHNM SMLYPPVSYL SQTGFMQPNI SSMSLLSGGL
301: KRQETHGYES DHHNLVHMNH ETGTAPDHED TTADMKVEP

Arabidopsis Description

BHLH76Transcription factor bHLH76 [Source:UniProtKB/Swiss-Prot;Acc:Q9C670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.