Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004348.1-P | Field mustard | nucleus | 96.66 | 97.27 |
| CDY33568 | Canola | nucleus | 94.57 | 93.98 |
| CDX81575 | Canola | nucleus | 81.42 | 82.11 |
| CDY45835 | Canola | nucleus | 75.37 | 79.69 |
| VIT_01s0010g00740.t01 | Wine grape | nucleus | 44.05 | 44.99 |
| CDY72360 | Canola | cytosol | 13.78 | 44.0 |
| PGSC0003DMT400050585 | Potato | nucleus | 45.51 | 41.92 |
| Solyc05g010610.2.1 | Tomato | nucleus | 45.09 | 41.78 |
| KRH75189 | Soybean | nucleus | 46.56 | 40.55 |
| KRH71031 | Soybean | nucleus | 46.35 | 40.29 |
| GSMUA_Achr6P36210_001 | Banana | nucleus | 22.96 | 40.0 |
| PGSC0003DMT400022704 | Potato | nucleus | 44.26 | 39.63 |
| PGSC0003DMT400004830 | Potato | nucleus | 37.79 | 39.09 |
| Solyc01g010130.2.1 | Tomato | nucleus | 43.42 | 38.73 |
| TraesCS5B01G248600.1 | Wheat | nucleus | 33.82 | 38.21 |
| TraesCS5D01G258300.1 | Wheat | nucleus | 33.82 | 38.21 |
| TraesCS5A01G250600.1 | Wheat | nucleus | 33.82 | 38.12 |
| GSMUA_Achr8P24490_001 | Banana | nucleus | 32.57 | 37.68 |
| Os09t0474100-01 | Rice | nucleus | 33.61 | 37.62 |
| KXG35834 | Sorghum | nucleus | 33.82 | 37.07 |
| Zm00001d020826_P001 | Maize | nucleus | 33.4 | 36.87 |
| Solyc04g005220.1.1 | Tomato | nucleus | 31.73 | 36.28 |
| CDY25986 | Canola | plastid | 16.49 | 36.24 |
| CDY31048 | Canola | nucleus | 23.59 | 35.99 |
| CDY08308 | Canola | nucleus | 21.5 | 35.27 |
| CDY18099 | Canola | nucleus | 16.28 | 34.98 |
| CDY37979 | Canola | nucleus | 19.42 | 34.96 |
| CDX93427 | Canola | nucleus | 19.42 | 34.7 |
| Zm00001d005964_P002 | Maize | nucleus | 32.78 | 34.66 |
| Os06t0275600-01 | Rice | cytosol, nucleus | 31.32 | 34.32 |
| CDY20659 | Canola | nucleus | 23.8 | 34.23 |
| CDY64034 | Canola | nucleus | 21.92 | 34.2 |
| CDY05670 | Canola | nucleus | 18.37 | 34.11 |
| CDX98249 | Canola | nucleus | 19.62 | 33.57 |
| CDX76288 | Canola | nucleus | 17.33 | 33.2 |
| CDY22605 | Canola | nucleus | 24.43 | 33.14 |
| CDY56230 | Canola | nucleus | 22.96 | 33.03 |
| GSMUA_Achr9P18510_001 | Banana | nucleus | 21.5 | 33.01 |
| CDX86296 | Canola | nucleus | 18.58 | 32.84 |
| CDY63738 | Canola | nucleus | 23.38 | 32.75 |
| GSMUA_Achr9P28060_001 | Banana | nucleus | 20.88 | 32.68 |
| CDY33821 | Canola | mitochondrion, plastid | 13.36 | 32.65 |
| CDY53834 | Canola | nucleus | 23.59 | 32.56 |
| CDX67710 | Canola | nucleus | 21.71 | 32.3 |
| CDX77488 | Canola | nucleus | 21.92 | 31.91 |
| CDY47666 | Canola | endoplasmic reticulum, extracellular | 9.19 | 31.88 |
| CDY45806 | Canola | nucleus | 19.42 | 31.74 |
| CDX85122 | Canola | nucleus | 21.92 | 31.72 |
| CDX84885 | Canola | nucleus | 19.42 | 31.31 |
| CDX75440 | Canola | nucleus | 21.5 | 31.31 |
| CDX79883 | Canola | nucleus | 19.62 | 31.13 |
| CDY17466 | Canola | nucleus | 17.95 | 30.94 |
| CDY53497 | Canola | nucleus | 19.83 | 30.74 |
| CDX88966 | Canola | nucleus | 21.29 | 30.72 |
| CDY61581 | Canola | plastid | 11.48 | 30.05 |
| CDX69067 | Canola | nucleus | 21.29 | 30.0 |
| CDX87255 | Canola | nucleus, plastid | 17.54 | 30.0 |
| CDY61420 | Canola | extracellular | 8.35 | 29.41 |
| CDY06074 | Canola | nucleus | 21.71 | 29.21 |
| CDX71994 | Canola | nucleus | 21.92 | 29.09 |
| OQU81018 | Sorghum | nucleus | 22.55 | 28.8 |
| CDY57925 | Canola | nucleus | 23.38 | 28.14 |
| CDY51061 | Canola | nucleus | 25.05 | 27.71 |
| GSMUA_Achr3P10600_001 | Banana | nucleus | 26.1 | 27.11 |
| CDY35923 | Canola | nucleus, plastid | 24.84 | 26.56 |
| CDY28061 | Canola | nucleus | 24.84 | 26.27 |
| HORVU0Hr1G020200.1 | Barley | nucleus | 23.8 | 25.91 |
| CDX85347 | Canola | nucleus | 26.51 | 25.87 |
| CDX86297 | Canola | nucleus | 26.3 | 25.71 |
| TraesCS7A01G211900.1 | Wheat | nucleus | 23.59 | 25.68 |
| TraesCS7D01G213500.1 | Wheat | nucleus | 23.59 | 25.68 |
| TraesCS7B01G118800.1 | Wheat | nucleus | 23.17 | 25.23 |
| CDY47665 | Canola | cytosol | 13.36 | 24.9 |
| Os08t0487700-00 | Rice | nucleus | 17.33 | 24.2 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | GO:A0A078E5V0 | EnsemblPlants:CDX95974 | ProteinID:CDX95974 |
| ProteinID:CDX95974.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00101994001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF184 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EEF2B4 | InterPro:bHLH_dom | SEG:seg |
Description
BnaA07g27570D
Coordinates
chrLK031892:-:361139..363761
Molecular Weight (calculated)
51712.7 Da
IEP (calculated)
5.007
GRAVY (calculated)
-0.849
Length
479 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVSEKDELR NGDDTTVNYD ESANNPPPDW RVSGSNPVSD SYPTENLMME TLWYDPANVQ AVGYGGFNGG GNASSSSSFR GNIDRSLEMG WSLPNLLPPK
101: GGNGMFLPNA GSFLPPSMAQ FPADSGFIER AARFSLFSGG SFSDMMNQQQ PLGNPESVGL FLQGQCPSSE VNVVGVAHND ASAGMKETNV RSSEQGNKQN
201: VSEDTQSSGG NDQKGGETSS KGFDSKKRKR NKQNAEADQS QRSQQSEEEP DNNGGGDKKR NDEQSPNSQG NKTNSGKQQG KQASDPKDGY IHVRARRGQA
301: TNSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPQMDFS LEGLLAKDAL QLRAGTSSAT PFPPNMPMVY
401: PPLPHGFMQQ TLSSMGRNVS SPLSPPINGG YKRQEANGWE GDLQNVIQIN YGAGDAPHDS QAAAATEASL PSSNMKVEP
101: GGNGMFLPNA GSFLPPSMAQ FPADSGFIER AARFSLFSGG SFSDMMNQQQ PLGNPESVGL FLQGQCPSSE VNVVGVAHND ASAGMKETNV RSSEQGNKQN
201: VSEDTQSSGG NDQKGGETSS KGFDSKKRKR NKQNAEADQS QRSQQSEEEP DNNGGGDKKR NDEQSPNSQG NKTNSGKQQG KQASDPKDGY IHVRARRGQA
301: TNSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPQMDFS LEGLLAKDAL QLRAGTSSAT PFPPNMPMVY
401: PPLPHGFMQQ TLSSMGRNVS SPLSPPINGG YKRQEANGWE GDLQNVIQIN YGAGDAPHDS QAAAATEASL PSSNMKVEP
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
Arabidopsis Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.