Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG35834 | Sorghum | nucleus | 93.32 | 92.68 |
| Os09t0474100-01 | Rice | nucleus | 79.72 | 80.84 |
| Zm00001d005964_P002 | Maize | nucleus | 83.41 | 79.91 |
| TraesCS5B01G248600.1 | Wheat | nucleus | 77.88 | 79.72 |
| TraesCS5A01G250600.1 | Wheat | nucleus | 77.65 | 79.29 |
| TraesCS5D01G258300.1 | Wheat | nucleus | 77.42 | 79.25 |
| GSMUA_Achr6P36210_001 | Banana | nucleus | 29.72 | 46.91 |
| VIT_01s0010g00740.t01 | Wine grape | nucleus | 42.86 | 39.66 |
| Bra038336.1-P | Field mustard | plastid | 32.26 | 38.36 |
| GSMUA_Achr8P24490_001 | Banana | nucleus | 36.41 | 38.16 |
| Solyc05g010610.2.1 | Tomato | nucleus | 41.94 | 35.2 |
| GSMUA_Achr9P28060_001 | Banana | nucleus | 24.65 | 34.97 |
| PGSC0003DMT400050585 | Potato | nucleus | 41.71 | 34.81 |
| CDY45835 | Canola | nucleus | 35.94 | 34.44 |
| Zm00001d007768_P001 | Maize | nucleus | 19.82 | 34.26 |
| GSMUA_Achr9P18510_001 | Banana | nucleus | 24.42 | 33.97 |
| PGSC0003DMT400004830 | Potato | nucleus | 36.18 | 33.91 |
| KRH75189 | Soybean | nucleus | 42.86 | 33.82 |
| CDY33568 | Canola | nucleus | 37.56 | 33.82 |
| Bra004348.1-P | Field mustard | nucleus | 36.87 | 33.61 |
| KRH71031 | Soybean | nucleus | 42.63 | 33.58 |
| Zm00001d033870_P001 | Maize | nucleus | 24.88 | 33.44 |
| CDX95974 | Canola | nucleus | 36.87 | 33.4 |
| Zm00001d034503_P002 | Maize | nucleus | 19.59 | 33.33 |
| PGSC0003DMT400022704 | Potato | nucleus | 40.78 | 33.08 |
| CDX81575 | Canola | nucleus | 35.94 | 32.84 |
| Solyc01g010130.2.1 | Tomato | nucleus | 40.32 | 32.59 |
| Zm00001d006065_P002 | Maize | nucleus | 26.27 | 32.57 |
| AT1G68920.1 | Thale cress | nucleus | 36.18 | 32.3 |
| Zm00001d031561_P002 | Maize | nucleus | 28.8 | 31.97 |
| Zm00001d021019_P001 | Maize | nucleus | 26.04 | 31.92 |
| GSMUA_Achr3P10600_001 | Banana | nucleus | 32.26 | 30.37 |
| Zm00001d049870_P001 | Maize | nucleus | 21.43 | 29.15 |
| Solyc04g005220.1.1 | Tomato | nucleus | 28.11 | 29.12 |
| Zm00001d051569_P001 | Maize | nucleus | 22.35 | 28.36 |
| Zm00001d031665_P001 | Maize | mitochondrion | 20.51 | 28.25 |
| Zm00001d021086_P001 | Maize | nucleus, plastid | 18.43 | 27.87 |
| Zm00001d042373_P002 | Maize | nucleus | 29.72 | 27.86 |
| Zm00001d012067_P003 | Maize | nucleus | 29.26 | 26.46 |
| Zm00001d046759_P001 | Maize | plastid | 21.66 | 26.4 |
| Zm00001d013357_P001 | Maize | nucleus | 20.97 | 26.15 |
| Zm00001d017778_P001 | Maize | nucleus | 22.81 | 25.78 |
| Zm00001d006110_P002 | Maize | nucleus, plastid | 18.89 | 25.55 |
| Zm00001d049158_P001 | Maize | nucleus | 25.58 | 25.0 |
| Zm00001d036807_P001 | Maize | nucleus | 21.2 | 24.86 |
| Zm00001d007311_P001 | Maize | nucleus | 24.42 | 22.99 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | UniProt:A0A060CUY1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EMBL:KJ726790 |
| ProteinID:ONM55675.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF182 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0001E234F7 | EnsemblPlantsGene:Zm00001d020826 | EnsemblPlants:Zm00001d020826_P001 | EnsemblPlants:Zm00001d020826_T001 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
bHLH-transcription factor 86Transcription factor bHLH76
Coordinates
chr7:+:133997692..134000698
Molecular Weight (calculated)
45648.6 Da
IEP (calculated)
6.250
GRAVY (calculated)
-0.476
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMNESGEKG MEGNASSGIP VDWQTQFSAA AFSCAPPQQQ QVPMMDSAFA SAGLWASTSQ AMALSDAGGR SAARAGFLAP VPGFLPQGLA HFPVDSGFIE
101: RAARASCFGG GGGGGVMAAF GAAADHQPMN SAFSGSSEAL LDHQRTKDGS DKGEPELGRN GHDGVLSSEA AAAGDCSSKG TSDSKKRRRP NEVMGGDQVQ
201: SSNLPADSAN ESVHSKDKGE ESSLATTTTG PGKSKGKGAR ETSESQKEDY IHVRARRGQA TNSHSLAERL RREKISERMK LLQDLVPGCS KVTGKAVMLD
301: EIINYVQSLQ RQVEFLSMKL ATVNPRLDLN IEGLLSKDLL RFPGVPSSSL GFSPEMMHPQ LQLSQPGLIQ GGAAGMANPD VFRRIMQAQL SAKDGSQMPP
401: HALNGAFSDV AQQQMAYPSS QDLSIGPSQD GFQM
101: RAARASCFGG GGGGGVMAAF GAAADHQPMN SAFSGSSEAL LDHQRTKDGS DKGEPELGRN GHDGVLSSEA AAAGDCSSKG TSDSKKRRRP NEVMGGDQVQ
201: SSNLPADSAN ESVHSKDKGE ESSLATTTTG PGKSKGKGAR ETSESQKEDY IHVRARRGQA TNSHSLAERL RREKISERMK LLQDLVPGCS KVTGKAVMLD
301: EIINYVQSLQ RQVEFLSMKL ATVNPRLDLN IEGLLSKDLL RFPGVPSSSL GFSPEMMHPQ LQLSQPGLIQ GGAAGMANPD VFRRIMQAQL SAKDGSQMPP
401: HALNGAFSDV AQQQMAYPSS QDLSIGPSQD GFQM
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
Arabidopsis Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.