Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P18510_001 | Banana | nucleus | 44.69 | 66.03 |
| GSMUA_Achr9P28060_001 | Banana | nucleus | 40.13 | 60.46 |
| GSMUA_Achr8P09170_001 | Banana | nucleus | 13.23 | 50.41 |
| GSMUA_Achr3P12130_001 | Banana | nucleus | 36.88 | 44.62 |
| GSMUA_Achr6P16480_001 | Banana | nucleus | 15.84 | 44.51 |
| GSMUA_Achr6P36210_001 | Banana | nucleus | 26.25 | 44.0 |
| GSMUA_Achr1P19120_001 | Banana | nucleus | 40.13 | 43.12 |
| GSMUA_Achr3P13490_001 | Banana | nucleus | 37.53 | 39.68 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 19.09 | 38.94 |
| GSMUA_Achr10P... | Banana | nucleus | 14.97 | 37.5 |
| GSMUA_Achr8P24490_001 | Banana | nucleus | 32.97 | 36.72 |
| GSMUA_Achr5P24960_001 | Banana | nucleus | 14.53 | 36.41 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.13 | 36.04 |
| GSMUA_Achr1P09570_001 | Banana | nucleus | 26.68 | 35.45 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.44 | 35.12 |
| GSMUA_Achr9P11020_001 | Banana | nucleus | 19.52 | 34.88 |
| VIT_01s0010g00740.t01 | Wine grape | nucleus | 34.71 | 34.12 |
| Zm00001d020826_P001 | Maize | nucleus | 30.37 | 32.26 |
| TraesCS5B01G248600.1 | Wheat | nucleus | 29.07 | 31.6 |
| TraesCS5D01G258300.1 | Wheat | nucleus | 29.07 | 31.6 |
| TraesCS5A01G250600.1 | Wheat | nucleus | 29.07 | 31.53 |
| Bra038336.1-P | Field mustard | plastid | 24.73 | 31.23 |
| KXG35834 | Sorghum | nucleus | 29.5 | 31.12 |
| Os09t0474100-01 | Rice | nucleus | 28.85 | 31.07 |
| GSMUA_Achr9P01040_001 | Banana | nucleus | 18.66 | 30.5 |
| Zm00001d005964_P002 | Maize | nucleus | 29.72 | 30.24 |
| Solyc05g010610.2.1 | Tomato | nucleus | 33.19 | 29.59 |
| PGSC0003DMT400050585 | Potato | nucleus | 32.97 | 29.23 |
| OQU81018 | Sorghum | nucleus | 23.21 | 28.53 |
| PGSC0003DMT400004830 | Potato | nucleus | 28.63 | 28.51 |
| GSMUA_Achr9P09770_001 | Banana | nucleus | 19.52 | 28.21 |
| GSMUA_Achr6P09050_001 | Banana | nucleus | 19.31 | 28.16 |
| GSMUA_Achr2P09660_001 | Banana | nucleus | 19.09 | 27.76 |
| CDY45835 | Canola | nucleus | 26.68 | 27.15 |
| GSMUA_Achr10P... | Banana | nucleus | 16.27 | 27.08 |
| KRH75189 | Soybean | nucleus | 32.1 | 26.91 |
| GSMUA_Achr9P07330_001 | Banana | nucleus | 21.04 | 26.8 |
| GSMUA_Achr7P01750_001 | Banana | nucleus | 19.52 | 26.79 |
| KRH71031 | Soybean | nucleus | 31.67 | 26.5 |
| PGSC0003DMT400022704 | Potato | nucleus | 30.59 | 26.36 |
| Bra004348.1-P | Field mustard | nucleus | 27.11 | 26.26 |
| Solyc01g010130.2.1 | Tomato | nucleus | 30.59 | 26.26 |
| CDY33568 | Canola | nucleus | 27.33 | 26.14 |
| CDX95974 | Canola | nucleus | 27.11 | 26.1 |
| GSMUA_Achr1P19610_001 | Banana | nucleus | 20.61 | 26.03 |
| CDX81575 | Canola | nucleus | 26.68 | 25.89 |
| AT1G68920.1 | Thale cress | nucleus | 27.11 | 25.72 |
| Os08t0487700-00 | Rice | nucleus | 19.09 | 25.66 |
| GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 19.96 | 25.07 |
| GSMUA_Achr3P02490_001 | Banana | nucleus | 22.78 | 24.88 |
| GSMUA_Achr6P27780_001 | Banana | nucleus | 27.33 | 24.14 |
| GSMUA_Achr7P06330_001 | Banana | nucleus | 19.09 | 24.04 |
| GSMUA_Achr4P19330_001 | Banana | nucleus | 20.17 | 24.03 |
| GSMUA_Achr9P22300_001 | Banana | nucleus | 14.97 | 23.79 |
| GSMUA_Achr10P... | Banana | nucleus | 20.61 | 23.63 |
| Solyc04g005220.1.1 | Tomato | nucleus | 21.04 | 23.15 |
| GSMUA_Achr2P21280_001 | Banana | nucleus | 24.95 | 22.86 |
| GSMUA_Achr2P06090_001 | Banana | nucleus | 22.78 | 21.97 |
| GSMUA_Achr2P21460_001 | Banana | nucleus | 18.22 | 21.71 |
| GSMUA_Achr10P... | Banana | nucleus | 19.52 | 21.28 |
| GSMUA_Achr7P22770_001 | Banana | nucleus | 20.17 | 21.04 |
| GSMUA_Achr3P17290_001 | Banana | plastid | 25.16 | 20.35 |
| GSMUA_Achr7P02770_001 | Banana | nucleus | 20.39 | 19.26 |
| GSMUA_Achr4P16120_001 | Banana | nucleus | 18.87 | 19.04 |
| GSMUA_Achr10P... | Banana | mitochondrion | 22.78 | 15.96 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P10600_001 | EnsemblPlants:GSMUA_Achr3T10600_001 | EnsemblPlantsGene:GSMUA_Achr3G10600_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| ncoils:Coil | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | PFAM:PF00010 | PFscan:PS50888 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0002950330 | UniProt:M0SDH7 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : |
Description
Putative Transcription factor bHLH49 [Source:GMGC_GENE;Acc:GSMUA_Achr3G10600_001]
Coordinates
chr3:+:7823298..7825935
Molecular Weight (calculated)
49573.9 Da
IEP (calculated)
6.375
GRAVY (calculated)
-0.622
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMHGKDGCN SLKNEDNLDY NYSGNSSDWQ QCNPSIGCLD SGNPSAAVSQ GNQIGSTPCS SISMADPFSA GLWNLSTEST SLDLCKDKLQ GSSNQITGNS
101: MSVGGTLLQT GSGVLHQSLS HFPSDSAFIE RAARFSCFGG SDLGGLMNPY SAAQSQSPHS NASRESSGAQ IQKNEINMME AVRGGSLSTT DHGSKEKDNS
201: HAAGNSSSTL PAAMKRKRPS EDMALDQAKV ASQISGEMDD DNMELEKKAE HNSSTAATSK PGGKQVKDSN ESSKEDFIHI RARRGQATNS HSLAERVRRE
301: KINERMKLLQ DLVPGCSKVT GKAMMLDEII NYVQSLQQQV EFLSMKLAAI NPRLDIDIEA VLSKYLLQTC NGPSAAMGSS SGIVRPPPLH PSQQGLAQAG
401: LSGNVNLPDL FRRSINAQMT APQGYKEPKM QVPNAWDEEL HNVMQMAYNG TVNLNTHRVQ Q
101: MSVGGTLLQT GSGVLHQSLS HFPSDSAFIE RAARFSCFGG SDLGGLMNPY SAAQSQSPHS NASRESSGAQ IQKNEINMME AVRGGSLSTT DHGSKEKDNS
201: HAAGNSSSTL PAAMKRKRPS EDMALDQAKV ASQISGEMDD DNMELEKKAE HNSSTAATSK PGGKQVKDSN ESSKEDFIHI RARRGQATNS HSLAERVRRE
301: KINERMKLLQ DLVPGCSKVT GKAMMLDEII NYVQSLQQQV EFLSMKLAAI NPRLDIDIEA VLSKYLLQTC NGPSAAMGSS SGIVRPPPLH PSQQGLAQAG
401: LSGNVNLPDL FRRSINAQMT APQGYKEPKM QVPNAWDEEL HNVMQMAYNG TVNLNTHRVQ Q
001: MDLSAKDEFS AEKRNPDNYD SVNNPSGDWR VDSYPSENLI SAGPASCSPS QMMDSFGQTL WYDPTSVQAV GYAGFNGGNA SSSSFRGSID RSLEMGWNLP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
101: NLLPPKGNGL FLPNASSFLP PSMAQFPADS GFIERAARFS LFSGGNFSDM VNQPLGNSEA IGLFLQGGGT MQGQCQSNEL NVGEPHNDVS VAVKESTVRS
201: SEQAKPNVPG SGNVSEDTQS SGGNGQKGRE TSSNTKKRKR NGQNSEAAQS HRSQQSEEEP DNNGDEKRND EQSPNSPGKK SNSGKQQGKQ SSDPPKDGYI
301: HVRARRGQAT NSHSLAERVR REKISERMKF LQDLVPGCNK VTGKAVMLDE IINYVQSLQR QVEFLSMKLA TVNPQMDFNL EGLLAKDALQ LRAGSSSTTP
401: FPPNMSMAYP PLPHGFMQQT LSSIGRTITS PLSPMNGGFK RQETNGWEGD LQNVIHINYG AGDVTPDPQA AATASLPAAN MKVEP
Arabidopsis Description
BHLH49Transcription factor bHLH49 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.