Factsheet for GSMUA_Achr7P01750_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P11020_001	Banana	nucleus	53.87	70.16
Solyc03g113560.2.1	Tomato	cytosol	21.13	69.61
HORVU5Hr1G107520.2	Barley	cytosol, nucleus	39.58	64.25
Os07t0193800-01	Rice	endoplasmic reticulum	38.39	62.02
Os03t0802900-01	Rice	nucleus	47.32	60.0
GSMUA_Achr4P17570_001	Banana	golgi, vacuole	65.18	59.67
TraesCS5D01G459800.1	Wheat	nucleus, plastid	44.64	59.52
TraesCS5B01G457600.1	Wheat	nucleus, plastid	44.64	59.06
Zm00001d007768_P001	Maize	nucleus	42.56	56.97
Zm00001d034503_P002	Maize	nucleus	43.15	56.86
Solyc04g005130.2.1	Tomato	nucleus	38.1	56.39
VIT_01s0026g01140.t01	Wine grape	nucleus	46.13	55.96
PGSC0003DMT400004855	Potato	nucleus	36.61	55.66
VIT_17s0000g05370.t01	Wine grape	nucleus	46.73	55.28
EER90712	Sorghum	nucleus	41.37	54.94
KRH56987	Soybean	plastid	36.61	54.91
KRH63442	Soybean	nucleus	39.58	54.73
KRH03393	Soybean	nucleus	37.2	54.59
KRH74729	Soybean	nucleus	42.86	54.55
KRH45811	Soybean	nucleus	43.45	53.48
KRH69414	Soybean	nucleus	40.48	53.33
KRH69415	Soybean	nucleus	41.07	53.08
KRH54478	Soybean	nucleus	41.96	52.42
PGSC0003DMT400062844	Potato	nucleus	45.24	52.23
PGSC0003DMT400058204	Potato	nucleus	40.48	50.37
Solyc05g006650.2.1	Tomato	nucleus	40.77	50.37
AT5G62610.2	Thale cress	nucleus	41.07	49.11
CDX87255	Canola	nucleus, plastid	40.77	48.93
GSMUA_Achr8P09170_001	Banana	nucleus	17.56	48.76
CDY37979	Canola	nucleus	38.39	48.5
Bra019935.1-P	Field mustard	nucleus	37.8	47.39
CDX93427	Canola	nucleus	37.8	47.39
GSMUA_Achr6P16480_001	Banana	nucleus	19.64	40.24
CDY61420	Canola	extracellular	15.77	38.97
GSMUA_Achr5P24960_001	Banana	nucleus	19.94	36.41
AT1G59640.2	Thale cress	nucleus	36.31	35.57
GSMUA_Achr10P...	Banana	nucleus	18.45	33.7
GSMUA_AchrUn_...	Banana	nucleus	22.32	30.99
GSMUA_Achr1P27010_001	Banana	nucleus	20.54	30.53
GSMUA_Achr6P36210_001	Banana	nucleus	23.81	29.09
GSMUA_Achr9P01040_001	Banana	nucleus	23.51	28.01
GSMUA_AchrUn_...	Banana	nucleus	23.21	27.56
GSMUA_Achr6P09050_001	Banana	nucleus	25.3	26.9
GSMUA_Achr10P...	Banana	nucleus	21.13	25.63
GSMUA_Achr2P09660_001	Banana	nucleus	23.81	25.24
GSMUA_Achr9P18510_001	Banana	nucleus	23.21	25.0
GSMUA_Achr10P...	Banana	nucleus	30.95	24.59
GSMUA_Achr9P28060_001	Banana	nucleus	22.02	24.18
GSMUA_Achr7P22770_001	Banana	nucleus	30.95	23.53
GSMUA_Achr9P09770_001	Banana	nucleus	22.32	23.51
GSMUA_Achr10P...	Banana	nucleus	27.68	23.13
GSMUA_Achr1P09570_001	Banana	nucleus	23.81	23.05
GSMUA_Achr4P16120_001	Banana	nucleus	31.25	22.98
GSMUA_Achr3P02490_001	Banana	nucleus	28.57	22.75
GSMUA_Achr3P12130_001	Banana	nucleus	25.3	22.31
GSMUA_Achr7P02770_001	Banana	nucleus	32.14	22.13
GSMUA_Achr9P07330_001	Banana	nucleus	23.81	22.1
GSMUA_Achr9P22300_001	Banana	nucleus	19.05	22.07
GSMUA_Achr8P24490_001	Banana	nucleus	27.08	21.98
GSMUA_Achr1P19610_001	Banana	nucleus	23.51	21.64
GSMUA_Achr7P06330_001	Banana	nucleus	23.51	21.58
GSMUA_Achr6P27780_001	Banana	nucleus	32.44	20.88
GSMUA_Achr2P21280_001	Banana	nucleus	30.65	20.48
GSMUA_Achr4P19330_001	Banana	nucleus	23.21	20.16
GSMUA_Achr2P06090_001	Banana	nucleus	27.98	19.67
GSMUA_Achr3P10600_001	Banana	nucleus	26.79	19.52
GSMUA_Achr3P13490_001	Banana	nucleus	25.3	19.5
GSMUA_Achr1P19120_001	Banana	nucleus	23.81	18.65
GSMUA_Achr2P21460_001	Banana	nucleus	20.83	18.09
GSMUA_Achr3P17290_001	Banana	plastid	30.65	18.07
GSMUA_Achr10P...	Banana	mitochondrion	30.06	15.35

Protein Annotations

EnsemblPlants:GSMUA_Achr7P01750_001	EnsemblPlants:GSMUA_Achr7T01750_001	EnsemblPlantsGene:GSMUA_Achr7G01750_001	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
PANTHER:PTHR12565	PANTHER:PTHR12565:SF305	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI000295D777	UniProt:M0TDW5	MapMan:15.5.32	MapMan:26.1.2.1.2	:

Description

bHLH transcription factor, putative [Source:GMGC_GENE;Acc:GSMUA_Achr7G01750_001]

Coordinates

chr7:-:1360762..1365566

Molecular Weight (calculated)

37050.9 Da

IEP (calculated)

7.928

GRAVY (calculated)

-0.617

Length

336 amino acids

Sequence
(BLAST)

001: MTEIIGFRGR YMQVCPSRSP PISELKNPLP HFPKIHTAST VTSLLDHRRS DPLPLGAWNP FVVDASLHSR PSLGMDPPSL MPRLPEMCRF PMLGMPPPEL
101: VPRVGRIGGD ASVEESTVTE QCGGSKGRRR RRDPPSSGGA TEDESSKFVS TSSGNELAEA EAKRLKAIKS TDGNDNIKSE AEASSGICNK LAAQNPQTTE
201: PPKQDYIHVR ARRGQATDSH SLSERARREK ISERMKILQD LVPGCNKVIG KASVLDEIIN YIQALQHQVE FLSMKLEAVN SPMNTTIEVF PSKDFSSQRY
301: DTTSSLAYSS QTREYEQGSG TEWLHMQVGG AFERVT

Best Arabidopsis Sequence Match ( AT1G59640.1 )
(BLAST)

001: MDPSGMMNEG GPFNLAEIWQ FPLNGVSTAG DSSRRSFVGP NQFGDADLTT AANGDPARMS HALSQAVIEG ISGAWKRRED ESKSAKIVST IGASEGENKR
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW LHMQIGSGGF ERTS

Arabidopsis Description

BPETranscription factor BPE [Source:UniProtKB/Swiss-Prot;Acc:Q0JXE7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.