Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400004855 | Potato | nucleus | 93.39 | 95.93 |
| Solyc03g113560.2.1 | Tomato | cytosol | 31.28 | 69.61 |
| Solyc05g006650.2.1 | Tomato | nucleus | 76.21 | 63.6 |
| HORVU5Hr1G107520.2 | Barley | cytosol, nucleus | 50.66 | 55.56 |
| KRH03393 | Soybean | nucleus | 55.07 | 54.59 |
| Os07t0193800-01 | Rice | endoplasmic reticulum | 49.78 | 54.33 |
| KRH56987 | Soybean | plastid | 52.86 | 53.57 |
| Os03t0802900-01 | Rice | nucleus | 57.27 | 49.06 |
| TraesCS5D01G459800.1 | Wheat | nucleus, plastid | 53.74 | 48.41 |
| GSMUA_Achr9P11020_001 | Banana | nucleus | 54.63 | 48.06 |
| Zm00001d034503_P002 | Maize | nucleus | 53.74 | 47.84 |
| EER90712 | Sorghum | nucleus | 52.86 | 47.43 |
| Zm00001d007768_P001 | Maize | nucleus | 52.42 | 47.41 |
| TraesCS5B01G457600.1 | Wheat | nucleus, plastid | 52.86 | 47.24 |
| CDX87255 | Canola | nucleus, plastid | 53.74 | 43.57 |
| AT5G62610.2 | Thale cress | nucleus | 53.74 | 43.42 |
| GSMUA_Achr7P01750_001 | Banana | nucleus | 56.39 | 38.1 |
| GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 54.63 | 33.79 |
| Solyc03g034000.2.1 | Tomato | nucleus | 35.24 | 30.08 |
| Solyc02g062690.2.1 | Tomato | mitochondrion, nucleus | 37.0 | 27.54 |
| Solyc03g097820.1.1 | Tomato | nucleus | 38.33 | 26.36 |
| Solyc06g072520.1.1 | Tomato | nucleus, plastid | 33.48 | 26.3 |
| Solyc09g097870.2.1 | Tomato | nucleus | 45.81 | 24.13 |
| Solyc10g079070.1.1 | Tomato | nucleus | 34.8 | 21.88 |
| Solyc12g098620.1.1 | Tomato | nucleus | 37.89 | 21.29 |
| Solyc01g109700.2.1 | Tomato | nucleus | 40.09 | 20.97 |
| Solyc09g057710.2.1 | Tomato | nucleus | 42.73 | 20.46 |
| Solyc04g077480.2.1 | Tomato | nucleus | 34.36 | 20.42 |
| Solyc06g083170.2.1 | Tomato | nucleus | 39.21 | 19.18 |
| Solyc05g010610.2.1 | Tomato | nucleus | 37.0 | 16.25 |
| Solyc01g010130.2.1 | Tomato | nucleus | 38.33 | 16.2 |
| Solyc04g005220.1.1 | Tomato | nucleus | 22.47 | 12.17 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0043565 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | UniProt:K4BNB9 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF305 | SMART:SM00353 | SUPFAM:SSF47459 | EnsemblPlantsGene:Solyc04g005130.2 | EnsemblPlants:Solyc04g005130.2.1 | UniParc:UPI0002765FD2 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4:-:88365..92094
Molecular Weight (calculated)
25028.2 Da
IEP (calculated)
6.970
GRAVY (calculated)
-0.727
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPHSTIMSA FQTATNLAEI WPYHHLLDHT TNHAATKRRD DDESAIAVST SGNALTESDS KRLKATRSNE NGEYSGGNSG KSSDQPAKPP AEPPKDYIHV
101: RARRGQATDS HSLAERARRE KISDRMKILQ DLVPGCNKVI GKALVLDEII NYVQSLQRQV EFLSMKLEAV NTRVTPTIEG IPTKDFGQQT FETNAMAFGS
201: QGTREYAGGT SPDWLHMQIG GGFERTT
101: RARRGQATDS HSLAERARRE KISDRMKILQ DLVPGCNKVI GKALVLDEII NYVQSLQRQV EFLSMKLEAV NTRVTPTIEG IPTKDFGQQT FETNAMAFGS
201: QGTREYAGGT SPDWLHMQIG GGFERTT
001: MDPSGMMNEG GPFNLAEIWQ FPLNGVSTAG DSSRRSFVGP NQFGDADLTT AANGDPARMS HALSQAVIEG ISGAWKRRED ESKSAKIVST IGASEGENKR
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW LHMQIGSGGF ERTS
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW LHMQIGSGGF ERTS
Arabidopsis Description
BPETranscription factor BPE [Source:UniProtKB/Swiss-Prot;Acc:Q0JXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.