Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400062844 | Potato | nucleus | 97.06 | 34.02 |
| Os07t0193800-01 | Rice | endoplasmic reticulum | 68.63 | 33.65 |
| HORVU5Hr1G107520.2 | Barley | cytosol, nucleus | 67.65 | 33.33 |
| Solyc04g005130.2.1 | Tomato | nucleus | 69.61 | 31.28 |
| KRH63442 | Soybean | nucleus | 74.51 | 31.28 |
| KRH54478 | Soybean | nucleus | 76.47 | 29.0 |
| VIT_17s0000g05370.t01 | Wine grape | nucleus | 80.39 | 28.87 |
| EER90712 | Sorghum | nucleus | 68.63 | 27.67 |
| Zm00001d034503_P002 | Maize | nucleus | 68.63 | 27.45 |
| Os03t0802900-01 | Rice | nucleus | 70.59 | 27.17 |
| TraesCS5B01G457600.1 | Wheat | nucleus, plastid | 67.65 | 27.17 |
| TraesCS5D01G459800.1 | Wheat | nucleus, plastid | 66.67 | 26.98 |
| GSMUA_Achr9P11020_001 | Banana | nucleus | 67.65 | 26.74 |
| Zm00001d007768_P001 | Maize | nucleus | 64.71 | 26.29 |
| Solyc05g006650.2.1 | Tomato | nucleus | 68.63 | 25.74 |
| GSMUA_Achr7P01750_001 | Banana | nucleus | 69.61 | 21.13 |
| GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 69.61 | 19.35 |
| Solyc03g034000.2.1 | Tomato | nucleus | 42.16 | 16.17 |
| Solyc02g062690.2.1 | Tomato | mitochondrion, nucleus | 44.12 | 14.75 |
| Solyc06g072520.1.1 | Tomato | nucleus, plastid | 41.18 | 14.53 |
| Solyc03g097820.1.1 | Tomato | nucleus | 44.12 | 13.64 |
| Solyc04g077480.2.1 | Tomato | nucleus | 43.14 | 11.52 |
| Solyc12g098620.1.1 | Tomato | nucleus | 45.1 | 11.39 |
| Solyc09g097870.2.1 | Tomato | nucleus | 48.04 | 11.37 |
| Solyc10g079070.1.1 | Tomato | nucleus | 39.22 | 11.08 |
| Solyc01g109700.2.1 | Tomato | nucleus | 47.06 | 11.06 |
| Solyc09g057710.2.1 | Tomato | nucleus | 49.02 | 10.55 |
| Solyc04g005220.1.1 | Tomato | nucleus | 40.2 | 9.79 |
| Solyc06g083170.2.1 | Tomato | nucleus | 43.14 | 9.48 |
| Solyc05g010610.2.1 | Tomato | nucleus | 48.04 | 9.48 |
| Solyc01g010130.2.1 | Tomato | nucleus | 49.02 | 9.31 |
Protein Annotations
| EnsemblPlants:Solyc03g113560.2.1 | EnsemblPlantsGene:Solyc03g113560.2 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | ncoils:Coil |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF305 | PFscan:PS50888 | SUPFAM:SSF47459 | UniParc:UPI0002767C27 | UniProt:K4BKK8 |
| MapMan:15.5.32 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:+:63660427..63662772
Molecular Weight (calculated)
11444.8 Da
IEP (calculated)
5.660
GRAVY (calculated)
-0.218
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MKILQDLVPG CNKVIGKALV LDEIINYIQS LQRQVEFLSM KLEAVNSRMN HPIETFPSKD LAPSAFDTSG MIFGTQAPRE YAQGTQSEWL HMQVGNSFDR
101: AT
101: AT
001: MDPSGMMNEG GPFNLAEIWQ FPLNGVSTAG DSSRRSFVGP NQFGDADLTT AANGDPARMS HALSQAVIEG ISGAWKRRED ESKSAKIVST IGASEGENKR
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW LHMQIGSGGF ERTS
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW LHMQIGSGGF ERTS
Arabidopsis Description
BPETranscription factor BPE [Source:UniProtKB/Swiss-Prot;Acc:Q0JXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.