Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH54478 | Soybean | nucleus | 93.0 | 84.01 |
Solyc03g113560.2.1 | Tomato | cytosol | 31.28 | 74.51 |
KRH03393 | Soybean | nucleus | 66.26 | 70.31 |
KRH56987 | Soybean | plastid | 60.91 | 66.07 |
VIT_17s0000g05370.t01 | Wine grape | nucleus | 66.26 | 56.69 |
Os07t0193800-01 | Rice | endoplasmic reticulum | 48.15 | 56.25 |
KRH69414 | Soybean | nucleus | 57.61 | 54.9 |
KRH74729 | Soybean | nucleus | 58.44 | 53.79 |
KRH45811 | Soybean | nucleus | 59.67 | 53.11 |
HORVU5Hr1G107520.2 | Barley | cytosol, nucleus | 44.86 | 52.66 |
KRH69415 | Soybean | nucleus | 55.56 | 51.92 |
PGSC0003DMT400062844 | Potato | nucleus | 61.73 | 51.55 |
GSMUA_Achr9P11020_001 | Banana | nucleus | 51.85 | 48.84 |
Os03t0802900-01 | Rice | nucleus | 53.09 | 48.68 |
Zm00001d007768_P001 | Maize | nucleus | 50.21 | 48.61 |
EER90712 | Sorghum | nucleus | 49.79 | 47.83 |
TraesCS5D01G459800.1 | Wheat | nucleus, plastid | 48.97 | 47.22 |
Zm00001d034503_P002 | Maize | nucleus | 49.38 | 47.06 |
TraesCS5B01G457600.1 | Wheat | nucleus, plastid | 48.15 | 46.06 |
GSMUA_Achr7P01750_001 | Banana | nucleus | 54.73 | 39.58 |
GSMUA_Achr4P17570_001 | Banana | golgi, vacuole | 54.32 | 35.97 |
KRH63842 | Soybean | nucleus | 35.8 | 25.14 |
KRH54121 | Soybean | nucleus | 34.57 | 24.07 |
KRH41084 | Soybean | nucleus | 33.33 | 23.89 |
KRH51523 | Soybean | nucleus | 37.45 | 23.33 |
KRH52141 | Soybean | nucleus | 27.98 | 22.74 |
KRH59766 | Soybean | nucleus | 31.69 | 22.51 |
KRG95332 | Soybean | nucleus | 32.51 | 21.58 |
KRH24463 | Soybean | nucleus | 35.39 | 21.29 |
KRH71879 | Soybean | nucleus | 30.86 | 21.19 |
KRH33022 | Soybean | nucleus | 30.86 | 21.01 |
KRH60839 | Soybean | nucleus | 37.04 | 20.93 |
KRH29448 | Soybean | nucleus | 35.8 | 20.67 |
KRH61450 | Soybean | nucleus | 31.69 | 20.48 |
KRH15460 | Soybean | nucleus | 35.8 | 20.28 |
KRG88634 | Soybean | nucleus, plastid | 35.8 | 20.0 |
KRH67006 | Soybean | nucleus | 32.51 | 19.75 |
KRG99606 | Soybean | nucleus | 42.8 | 17.93 |
KRH46615 | Soybean | nucleus | 43.21 | 17.92 |
KRH07417 | Soybean | nucleus, plastid | 43.21 | 17.83 |
KRH66158 | Soybean | nucleus, plastid | 42.39 | 17.34 |
KRH75189 | Soybean | nucleus | 36.63 | 16.18 |
KRH71031 | Soybean | nucleus | 34.57 | 15.24 |
Protein Annotations
EntrezGene:100306638 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | EMBL:ACUP02002689 | ncoils:Coil |
EnsemblPlantsGene:GLYMA_04G176900 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
UniProt:I1JX08 | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH63442 | ProteinID:KRH63442 | ProteinID:KRH63442.1 |
PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF305 | SMART:SM00353 | SUPFAM:SSF47459 |
UniParc:UPI00023C0329 | InterPro:bHLH_dom | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:44025137..44029322
Molecular Weight (calculated)
26200.6 Da
IEP (calculated)
6.632
GRAVY (calculated)
-0.562
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPPLISDST FSPAYSLAEI WPGMPHFPDH SHLTATAPTK GKDSTAADEV LSSTTTANLS NNDSGSNKRM KVGGSSFEND GFKAEAEASS VGGNKSSEQS
101: NKPCEAPKPD YIHVRARRGQ ATDSHSLAER ARREKISERM KILQDLVPGC NKVIGKALVL DEIINYIQSL QRQVEFLSMK LEAVNSRMNT NPTIDGFPSK
201: DVGTQPFDIA GMVFGSQAAR GYAQGSSHPG WLHMQIGGGF ETT
101: NKPCEAPKPD YIHVRARRGQ ATDSHSLAER ARREKISERM KILQDLVPGC NKVIGKALVL DEIINYIQSL QRQVEFLSMK LEAVNSRMNT NPTIDGFPSK
201: DVGTQPFDIA GMVFGSQAAR GYAQGSSHPG WLHMQIGGGF ETT
001: MDPPLVNDSS FSAANPSSYT LSEIWPFPVN DAVRSGLRLA VNSGRVFTRS EHSGNKDVSA AEESTVTDLT AGWGSRKTRD LNSEDDSSKM VSSSSSGNEL
101: KESGDKKRKL CGSESGNGDG SMRPEGETSS GGGGSKATEQ KNKPEPPKDY IHVRARRGQA TDRHSLAERA RREKISEKMT ALQDIIPGCN KIIGKALVLD
201: EIINYIQSLQ RQVEFLSMKL EVVNSGASTG PTIGVFPSGD LGTLPIDVHR TIYEQQEANE TRVSQPEWLH MQVDGNFNRT T
101: KESGDKKRKL CGSESGNGDG SMRPEGETSS GGGGSKATEQ KNKPEPPKDY IHVRARRGQA TDRHSLAERA RREKISEKMT ALQDIIPGCN KIIGKALVLD
201: EIINYIQSLQ RQVEFLSMKL EVVNSGASTG PTIGVFPSGD LGTLPIDVHR TIYEQQEANE TRVSQPEWLH MQVDGNFNRT T
Arabidopsis Description
BHLH79Transcription factor bHLH79 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV17]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.