Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH46615 | Soybean | nucleus | 91.21 | 90.27 |
| KRH07417 | Soybean | nucleus, plastid | 73.45 | 72.33 |
| KRH66158 | Soybean | nucleus, plastid | 72.93 | 71.21 |
| AT3G07340.1 | Thale cress | nucleus | 42.07 | 53.51 |
| Bra029640.1-P | Field mustard | nucleus, plastid | 39.48 | 51.58 |
| Bra020691.1-P | Field mustard | nucleus | 38.97 | 50.79 |
| CDY51061 | Canola | nucleus | 37.76 | 50.58 |
| CDY35923 | Canola | nucleus, plastid | 38.97 | 50.45 |
| CDY28061 | Canola | nucleus | 39.31 | 50.33 |
| AT5G48560.1 | Thale cress | nucleus | 43.1 | 50.2 |
| CDY05670 | Canola | nucleus | 22.24 | 50.0 |
| CDX86297 | Canola | nucleus | 42.24 | 50.0 |
| CDX85347 | Canola | nucleus | 42.24 | 49.9 |
| Bra037478.1-P | Field mustard | nucleus | 41.9 | 49.59 |
| CDX86296 | Canola | nucleus | 23.1 | 49.45 |
| KRH45811 | Soybean | nucleus | 21.55 | 45.79 |
| KRH03393 | Soybean | nucleus | 17.24 | 43.67 |
| KRH56987 | Soybean | plastid | 16.72 | 43.3 |
| KRH63442 | Soybean | nucleus | 17.93 | 42.8 |
| KRH69414 | Soybean | nucleus | 18.62 | 42.35 |
| KRH69415 | Soybean | nucleus | 18.45 | 41.15 |
| KRH74729 | Soybean | nucleus | 18.45 | 40.53 |
| KRH54478 | Soybean | nucleus | 18.28 | 39.41 |
| KRH24463 | Soybean | nucleus | 24.83 | 35.64 |
| KRH52141 | Soybean | nucleus | 17.76 | 34.45 |
| KRH29448 | Soybean | nucleus | 24.48 | 33.73 |
| KRH51523 | Soybean | nucleus | 22.41 | 33.33 |
| KRH63842 | Soybean | nucleus | 19.31 | 32.37 |
| KRH41084 | Soybean | nucleus | 18.28 | 31.27 |
| KRH54121 | Soybean | nucleus | 18.79 | 31.23 |
| KRH61450 | Soybean | nucleus | 20.0 | 30.85 |
| KRH71879 | Soybean | nucleus | 18.62 | 30.51 |
| KRH59766 | Soybean | nucleus | 17.93 | 30.41 |
| KRH15460 | Soybean | nucleus | 22.41 | 30.3 |
| KRH60839 | Soybean | nucleus | 22.41 | 30.23 |
| KRH33022 | Soybean | nucleus | 18.45 | 29.97 |
| KRG95332 | Soybean | nucleus | 18.79 | 29.78 |
| KRG88634 | Soybean | nucleus, plastid | 22.24 | 29.66 |
| KRH75189 | Soybean | nucleus | 27.76 | 29.27 |
| KRH71031 | Soybean | nucleus | 27.24 | 28.68 |
| KRH67006 | Soybean | nucleus | 19.31 | 28.0 |
Protein Annotations
| EntrezGene:100787699 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | EMBL:ACUP02011214 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_18G156900 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| UniProt:I1N1Y2 | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRG99606 | ProteinID:KRG99606 | ProteinID:KRG99606.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI00023DB9A7 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:34846074..34851034
Molecular Weight (calculated)
62986.5 Da
IEP (calculated)
6.566
GRAVY (calculated)
-0.673
Length
580 amino acids
Sequence
(BLAST)
(BLAST)
001: MENQFFLNAG VPPQLHFEPS PHGHQPCPPP SWQSSLSSAM DVQVTVLNCS TEQTQDCFYN TTPTWDKSTD HGLQFDSALS SMVSSPAASN SNISSENFVI
101: RELIGKLGNI GGGGGSDEIS PHSQPLVGAS FYINCNNNST NTSCYSTPLS SPPKVNTIKI PTMVNHLVKE GMPPSLETPM SLNSTVAKFS ADPGFAERAA
201: KFSCFGSRSL NGRTTQLGLN NAELAQRSSL VENGKRLPRV SSSPSLKVLE SQMGTQENKN SPLQDLMELA NSQEESTISE QTPNGDTGVK PSPYVNSRKR
301: KGPSKGKAKE TSASINPPMA AEASEDWNAK RSKPNAGEGN ENGQVKAEEE SKGGNSNAND EKQNKSNSKP PEPPKDYIHV RARRGQATDS HSLAERVRRE
401: KISERMKLLQ DLVPGCNKVT GKALMLDEII NYVQSLQRQV EFLSMKLASV NTRLDFSIES LISKDIFQSN NSLAHPIFLI DSSAPPFYGQ HPQPNPAVHN
501: NIPNGTMTHN SVDPLDTGLC QNLGMHLPHL NDFNEGGSQY AKPFSEDDLH TIIQMGFGQN ANRITPIQSQ SFNGSNQVPL
101: RELIGKLGNI GGGGGSDEIS PHSQPLVGAS FYINCNNNST NTSCYSTPLS SPPKVNTIKI PTMVNHLVKE GMPPSLETPM SLNSTVAKFS ADPGFAERAA
201: KFSCFGSRSL NGRTTQLGLN NAELAQRSSL VENGKRLPRV SSSPSLKVLE SQMGTQENKN SPLQDLMELA NSQEESTISE QTPNGDTGVK PSPYVNSRKR
301: KGPSKGKAKE TSASINPPMA AEASEDWNAK RSKPNAGEGN ENGQVKAEEE SKGGNSNAND EKQNKSNSKP PEPPKDYIHV RARRGQATDS HSLAERVRRE
401: KISERMKLLQ DLVPGCNKVT GKALMLDEII NYVQSLQRQV EFLSMKLASV NTRLDFSIES LISKDIFQSN NSLAHPIFLI DSSAPPFYGQ HPQPNPAVHN
501: NIPNGTMTHN SVDPLDTGLC QNLGMHLPHL NDFNEGGSQY AKPFSEDDLH TIIQMGFGQN ANRITPIQSQ SFNGSNQVPL
001: MENELFMNAG VSHPPVMTSP SSSSAMLKWV SMETQPVDPS LSRNLFWEKS TEQSIFDSAL SSLVSSPTPS NSNFSVGGVG GENVIMRELI GKLGNIGDIY
101: GITASNGNSC YATPMSSPPP GSMMETKTTT PMAELSGDPG FAERAARFSC FGSRSFNSRT NSPFPINNEP PITTNEKMPR VSSSPVFKPL ASHVPAGESS
201: GELSRKRKTK SKQNSPSAVS SSKEIEEKED SDPKRCKKSE ENGDKTKSID PYKDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQDL VPGCNKVTGK
301: ALMLDEIINY VQSLQRQVEF LSMKLSSVNT RLDFNMDALL SKDIFPSSNN LMHHQQVLQL DSSAETLLGD HHNKNLQLNP DISSNNVINP LETSETRSFI
401: SHLPTLAHFT DSISQYSTFS EDDLHSIIHM GFAQNRLQEL NQGSSNQVPS HMKAEL
101: GITASNGNSC YATPMSSPPP GSMMETKTTT PMAELSGDPG FAERAARFSC FGSRSFNSRT NSPFPINNEP PITTNEKMPR VSSSPVFKPL ASHVPAGESS
201: GELSRKRKTK SKQNSPSAVS SSKEIEEKED SDPKRCKKSE ENGDKTKSID PYKDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQDL VPGCNKVTGK
301: ALMLDEIINY VQSLQRQVEF LSMKLSSVNT RLDFNMDALL SKDIFPSSNN LMHHQQVLQL DSSAETLLGD HHNKNLQLNP DISSNNVINP LETSETRSFI
401: SHLPTLAHFT DSISQYSTFS EDDLHSIIHM GFAQNRLQEL NQGSSNQVPS HMKAEL
Arabidopsis Description
BHLH62Transcription factor bHLH62 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRT2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.