CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 5
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66158	Soybean	nucleus, plastid	92.7	91.92
KRG99606	Soybean	nucleus	72.33	73.45
KRH46615	Soybean	nucleus	71.48	71.84
AT3G07340.1	Thale cress	nucleus	39.73	51.32
CDY05670	Canola	nucleus	22.24	50.78
CDX86296	Canola	nucleus	23.26	50.55
Bra029640.1-P	Field mustard	nucleus, plastid	38.03	50.45
CDY28061	Canola	nucleus	37.86	49.23
CDY51061	Canola	nucleus	36.16	49.19
Bra020691.1-P	Field mustard	nucleus	36.84	48.76
CDY35923	Canola	nucleus, plastid	37.01	48.66
CDX86297	Canola	nucleus	40.24	48.37
CDX85347	Canola	nucleus	40.24	48.27
Bra037478.1-P	Field mustard	nucleus	39.9	47.96
AT5G48560.1	Thale cress	nucleus	40.24	47.59
KRH03393	Soybean	nucleus	17.66	45.41
KRH56987	Soybean	plastid	17.15	45.09
KRH45811	Soybean	nucleus	20.54	44.32
KRH63442	Soybean	nucleus	17.83	43.21
KRH69414	Soybean	nucleus	18.68	43.14
KRH69415	Soybean	nucleus	18.17	41.15
KRH54478	Soybean	nucleus	18.68	40.89
KRH74729	Soybean	nucleus	17.83	39.77
KRH52141	Soybean	nucleus	17.49	34.45
KRH24463	Soybean	nucleus	23.6	34.41
KRH51523	Soybean	nucleus	22.07	33.33
KRH29448	Soybean	nucleus	23.6	33.02
KRH63842	Soybean	nucleus	19.35	32.95
KRH41084	Soybean	nucleus	18.68	32.45
KRH54121	Soybean	nucleus	19.02	32.09
KRG95332	Soybean	nucleus	19.86	31.97
KRH71879	Soybean	nucleus	19.19	31.92
KRH59766	Soybean	nucleus	18.34	31.58
KRH33022	Soybean	nucleus	19.02	31.37
KRH61450	Soybean	nucleus	19.86	31.12
KRH15460	Soybean	nucleus	22.41	30.77
KRG88634	Soybean	nucleus, plastid	22.41	30.34
KRH75189	Soybean	nucleus	27.5	29.45
KRH71031	Soybean	nucleus	27.5	29.4
KRH60839	Soybean	nucleus	21.39	29.3
KRH67006	Soybean	nucleus	19.86	29.25

Protein Annotations

EntrezGene:100801233	MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EMBL:ACUP02009987	ncoils:Coil
EnsemblPlantsGene:GLYMA_16G087300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
UniProt:I1MM86	InterPro:IPR011598	InterPro:IPR036638	EnsemblPlants:KRH07417	ProteinID:KRH07417	ProteinID:KRH07417.1
PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF184	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI00023D6D1C	InterPro:bHLH_dom	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:10987758..10991342

Molecular Weight (calculated)

64074.7 Da

IEP (calculated)

6.614

GRAVY (calculated)

-0.694

Length

589 amino acids

Sequence
(BLAST)

001: MENQFFLASG VSQTQQHPLH FEPSPPNPSS VPSWQSLSPP NMGIQLTVMN CAPEQTQDCF YNPNWDKSTA DHGLHHFDSS ALSSMVSSPA ASSNPNNKSN
101: ENFIIRELVG KLGPIGSSDE IPQHSPHPLV VASSCMNSNG NNSTYTSCYS TPLSSPPKVN IVHSLVNERL ANLGGGKSTM ALNSSVAEFS ADPGFAERAA
201: KFSCFGSRSF NDRSVQLGVN NAELAQRSAP AMEHGGKLPR VSSSPLLKTL GSQMGAQENK NSAIHQEQEK MEGANSQEES TISEQAPNGE IGVKTSQDMM
301: NSRKRKASSK GKAKETSNSF NPTKGVEGSE DSNSKRSKPN EGDGNENGQV KVEEESKAEE EKQNKSNSKP PEPPKDYIHV RARRGQATDS HSLAERVRRE
401: KISERMKLLQ DLVPGCNKVT GKALMLDEII NYVQSLQRQV EFLSMKLASV NTRMDLSIEN LISKDVFQSN NSLATLPNAV FPLDSSAQTF YGHQPQQNNP
501: VAHNNIPNRS VTHCSVDPLD TSLCQNLAMQ LPPLNVFNDG GSQFPLAFLE DDLHTIVQMG FGQAANRKTP IQSPSFNGSN NVPQMKVEL

Best Arabidopsis Sequence Match ( AT3G07340.1 )
(BLAST)

001: MENELFMNAG VSHPPVMTSP SSSSAMLKWV SMETQPVDPS LSRNLFWEKS TEQSIFDSAL SSLVSSPTPS NSNFSVGGVG GENVIMRELI GKLGNIGDIY
101: GITASNGNSC YATPMSSPPP GSMMETKTTT PMAELSGDPG FAERAARFSC FGSRSFNSRT NSPFPINNEP PITTNEKMPR VSSSPVFKPL ASHVPAGESS
201: GELSRKRKTK SKQNSPSAVS SSKEIEEKED SDPKRCKKSE ENGDKTKSID PYKDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQDL VPGCNKVTGK
301: ALMLDEIINY VQSLQRQVEF LSMKLSSVNT RLDFNMDALL SKDIFPSSNN LMHHQQVLQL DSSAETLLGD HHNKNLQLNP DISSNNVINP LETSETRSFI
401: SHLPTLAHFT DSISQYSTFS EDDLHSIIHM GFAQNRLQEL NQGSSNQVPS HMKAEL

Arabidopsis Description

BHLH62Transcription factor bHLH62 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRT2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.