Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G34530.1 | KRG92422 | AT1G04400.1 | 22739826 |
| AT4G34530.1 | KRH13218 | AT1G04400.1 | 22739826 |
| AT4G34530.1 | KRH34384 | AT1G04400.1 | 22739826 |
| AT4G34530.1 | KRH69122 | AT1G04400.1 | 22739826 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH24463 | Soybean | nucleus | 80.76 | 84.16 |
| KRH51523 | Soybean | nucleus | 51.31 | 55.38 |
| VIT_03s0038g04760.t01 | Wine grape | nucleus | 55.11 | 51.21 |
| KRH60839 | Soybean | nucleus | 51.54 | 50.47 |
| PGSC0003DMT400001888 | Potato | nucleus | 44.89 | 42.76 |
| Solyc01g109700.2.1 | Tomato | nucleus | 42.99 | 41.71 |
| KRH56987 | Soybean | plastid | 20.67 | 38.84 |
| KRH69414 | Soybean | nucleus | 23.28 | 38.43 |
| CDX76288 | Canola | nucleus | 22.8 | 38.4 |
| Bra034636.1-P | Field mustard | nucleus | 25.42 | 38.08 |
| CDY17466 | Canola | nucleus | 24.7 | 37.41 |
| Bra011540.1-P | Field mustard | nucleus | 28.98 | 37.2 |
| KRH74729 | Soybean | nucleus | 23.28 | 37.12 |
| KRH69415 | Soybean | nucleus | 22.8 | 36.92 |
| CDX75440 | Canola | nucleus | 28.74 | 36.78 |
| KRH03393 | Soybean | nucleus | 19.95 | 36.68 |
| AT4G34530.1 | Thale cress | nucleus | 28.5 | 35.82 |
| KRH63442 | Soybean | nucleus | 20.67 | 35.8 |
| KRH45811 | Soybean | nucleus | 23.04 | 35.53 |
| CDX69067 | Canola | nucleus | 28.03 | 34.71 |
| GSMUA_Achr6P09050_001 | Banana | nucleus | 24.7 | 32.91 |
| KRH54478 | Soybean | nucleus | 20.9 | 32.71 |
| TraesCS6B01G300400.1 | Wheat | nucleus | 26.84 | 32.19 |
| TraesCS6D01G253000.1 | Wheat | nucleus | 26.84 | 31.92 |
| Os02t0705500-01 | Rice | nucleus | 26.84 | 31.3 |
| TraesCS6A01G273000.2 | Wheat | nucleus | 26.84 | 31.3 |
| EES05656 | Sorghum | nucleus | 26.37 | 30.92 |
| KRH63842 | Soybean | nucleus | 25.18 | 30.64 |
| KRH54121 | Soybean | nucleus | 24.94 | 30.09 |
| Zm00001d051569_P001 | Maize | nucleus | 24.23 | 29.82 |
| KRH41084 | Soybean | nucleus | 23.99 | 29.79 |
| HORVU6Hr1G068980.2 | Barley | nucleus | 27.08 | 29.53 |
| Zm00001d017778_P001 | Maize | nucleus | 26.6 | 29.17 |
| GSMUA_Achr10P... | Banana | nucleus | 27.79 | 29.1 |
| KRH59766 | Soybean | nucleus | 22.8 | 28.07 |
| KRH52141 | Soybean | nucleus | 19.48 | 27.42 |
| KRH71879 | Soybean | nucleus | 22.8 | 27.12 |
| KRH33022 | Soybean | nucleus | 22.33 | 26.33 |
| KRH15460 | Soybean | nucleus | 26.37 | 25.87 |
| KRH61450 | Soybean | nucleus | 23.04 | 25.8 |
| KRG95332 | Soybean | nucleus | 22.33 | 25.68 |
| KRG88634 | Soybean | nucleus, plastid | 26.37 | 25.52 |
| KRG99606 | Soybean | nucleus | 33.73 | 24.48 |
| KRH46615 | Soybean | nucleus | 33.97 | 24.4 |
| KRH66158 | Soybean | nucleus, plastid | 33.73 | 23.91 |
| KRH07417 | Soybean | nucleus, plastid | 33.02 | 23.6 |
| KRH67006 | Soybean | nucleus | 21.85 | 23.0 |
| KRH75189 | Soybean | nucleus | 29.22 | 22.36 |
| KRH71031 | Soybean | nucleus | 28.98 | 22.14 |
Protein Annotations
| EntrezGene:100794256 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | EMBL:ACUP02006801 | EnsemblPlantsGene:GLYMA_11G117100 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | UniProt:K7LP95 | EnsemblPlants:KRH29448 | ProteinID:KRH29448 | ProteinID:KRH29448.1 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00029527C2 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:-:8899120..8902345
Molecular Weight (calculated)
46061.1 Da
IEP (calculated)
7.340
GRAVY (calculated)
-0.575
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MLHCLNTSGN LGATCSDMTV LERQREATIK WQQHLQNNQP PYLTDFNVNV NAVFSSSSSS SQSQGLVMNI CADSALGEVL THSVKPDPGV WPEFDAGFGS
101: SSGFLPTISP TCSRGGDLVS PKENMASAKE NTKKRKPQNS KVVVAASDNK QDKRVKASGE EGESKVTEQT SNKNGKSNAN KNNNRETTSA ETSKDNSKGS
201: EVQNQKPEYI HVRARRGQAT DSHSLAERVR REKISERMKY LQDLVPGCNK VAGKAGMLDE IINYVQSLQR QVEFLSMKLA AVNPRLDFNL DELFTKEVFP
301: SCAQSFPNIG MPLDMSMSNN PSYLPFNSAQ QLVSCCGGLI NNMGISPPNM GLRRNISTSP VPLPETFLDS SCFTQILPSS NWEGGDFQSL YNVAFDQGRT
401: ASFPSQPFTG LVEASNLKME M
101: SSGFLPTISP TCSRGGDLVS PKENMASAKE NTKKRKPQNS KVVVAASDNK QDKRVKASGE EGESKVTEQT SNKNGKSNAN KNNNRETTSA ETSKDNSKGS
201: EVQNQKPEYI HVRARRGQAT DSHSLAERVR REKISERMKY LQDLVPGCNK VAGKAGMLDE IINYVQSLQR QVEFLSMKLA AVNPRLDFNL DELFTKEVFP
301: SCAQSFPNIG MPLDMSMSNN PSYLPFNSAQ QLVSCCGGLI NNMGISPPNM GLRRNISTSP VPLPETFLDS SCFTQILPSS NWEGGDFQSL YNVAFDQGRT
401: ASFPSQPFTG LVEASNLKME M
001: MLEGLVSQES LSLNSMDMSV LERLKWVQQQ QQQLQQVVSH SSNNSPELLQ ILQFHGSNND ELLESSFSQF QMLGSGFGPN YNMGFGPPHE SISRTSSCHM
101: EPVDTMEVLL KTGEETRAVA LKNKRKPEVK TREEQKTEKK IKVEAETESS MKGKSNMGNT EASSDTSKET SKGASENQKL DYIHVRARRG QATDRHSLAE
201: RARREKISKK MKYLQDIVPG CNKVTGKAGM LDEIINYVQC LQRQVEFLSM KLAVLNPELE LAVEDVSVKQ AYFTNVVASK QSIMVDVPLF PLDQQGSLDL
301: SAINPNQTTS IEAPSGSWET QSQSLYNTSS LGFHY
101: EPVDTMEVLL KTGEETRAVA LKNKRKPEVK TREEQKTEKK IKVEAETESS MKGKSNMGNT EASSDTSKET SKGASENQKL DYIHVRARRG QATDRHSLAE
201: RARREKISKK MKYLQDIVPG CNKVTGKAGM LDEIINYVQC LQRQVEFLSM KLAVLNPELE LAVEDVSVKQ AYFTNVVASK QSIMVDVPLF PLDQQGSLDL
301: SAINPNQTTS IEAPSGSWET QSQSLYNTSS LGFHY
Arabidopsis Description
Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IQH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.