Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- extracellular 6
- mitochondrion 1
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89827 | Canola | cytosol, mitochondrion | 58.33 | 11.29 |
| KRG92422 | Soybean | cytosol | 65.48 | 8.68 |
| KRH34384 | Soybean | cytosol | 65.48 | 8.57 |
| CDY18229 | Canola | cytosol, mitochondrion | 58.33 | 8.51 |
| KRH69122 | Soybean | cytosol | 60.71 | 8.5 |
| Bra015313.1-P | Field mustard | cytosol | 58.33 | 8.49 |
| AT1G04400.1 | Thale cress | cytosol | 59.52 | 8.17 |
| CDX86636 | Canola | cytosol | 59.52 | 8.08 |
| Bra030568.1-P | Field mustard | cytosol | 59.52 | 8.08 |
| CDY15503 | Canola | cytosol | 59.52 | 8.05 |
| VIT_05s0049g00960.t01 | Wine grape | cytosol | 60.71 | 7.89 |
| Solyc09g090100.2.1 | Tomato | cytosol | 59.52 | 7.87 |
| Zm00001d045944_P007 | Maize | cytosol | 60.71 | 7.8 |
| GSMUA_Achr5P18570_001 | Banana | cytosol | 61.9 | 7.77 |
| PGSC0003DMT400044219 | Potato | cytosol | 59.52 | 7.73 |
| Os02t0625000-01 | Rice | cytosol | 59.52 | 7.68 |
| TraesCS6D01G211700.1 | Wheat | cytosol, golgi, mitochondrion, nucleus | 59.52 | 7.66 |
| EER88355 | Sorghum | mitochondrion | 59.52 | 7.65 |
| HORVU6Hr1G058740.2 | Barley | cytosol | 59.52 | 7.62 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, peroxisome | 59.52 | 7.62 |
| TraesCS6B01G257600.2 | Wheat | cytosol | 58.33 | 7.54 |
| TraesCS6A01G223700.1 | Wheat | cytosol, golgi, mitochondrion, nucleus | 58.33 | 7.5 |
| KRH18908 | Soybean | cytosol | 55.95 | 6.9 |
| KRH62344 | Soybean | cytosol | 54.76 | 6.75 |
| KRH16735 | Soybean | cytosol | 54.76 | 6.75 |
| KRH53063 | Soybean | cytosol | 54.76 | 6.74 |
| KRH61917 | Soybean | plastid | 23.81 | 3.42 |
| KRH44412 | Soybean | mitochondrion, plastid | 19.05 | 2.84 |
| KRH69286 | Soybean | plastid | 0.0 | 0.0 |
| KRH31864 | Soybean | cytosol, nucleus, plastid, vacuole | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02009671 | EnsemblPlants:KRH13218 | EnsemblPlantsGene:GLYMA_15G223700 | Gene3D:1.10.579.10 | InterPro:Crypto/Photolyase_FAD-like_sf | InterPro:Cryptochr/Photolyase_FAD-bd |
| PANTHER:PTHR11455 | PANTHER:PTHR11455:SF44 | PFAM:PF03441 | ProteinID:KRH13218 | ProteinID:KRH13218.1 | SUPFAM:SSF48173 |
| UniParc:UPI000295C9AA | UniProt:K7MD52 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr15:+:40768309..40768563
Molecular Weight (calculated)
9858.0 Da
IEP (calculated)
5.454
GRAVY (calculated)
0.160
Length
84 amino acids
Sequence
(BLAST)
(BLAST)
1: MVANFAVKML LLPWKWGMKY FWDTLLDADL ESNILGWQYI SGGLTDGHEL ERLDNPKVCH VFLHSKDLQF AWYHSDVIIL YSLV
001: MKMDKKTIVW FRRDLRIEDN PALAAAAHEG SVFPVFIWCP EEEGQFYPGR ASRWWMKQSL AHLSQSLKAL GSDLTLIKTH NTISAILDCI RVTGATKVVF
101: NHLYDPVSLV RDHTVKEKLV ERGISVQSYN GDLLYEPWEI YCEKGKPFTS FNSYWKKCLD MSIESVMLPP PWRLMPITAA AEAIWACSIE ELGLENEAEK
201: PSNALLTRAW SPGWSNADKL LNEFIEKQLI DYAKNSKKVV GNSTSLLSPY LHFGEISVRH VFQCARMKQI IWARDKNSEG EESADLFLRG IGLREYSRYI
301: CFNFPFTHEQ SLLSHLRFFP WDADVDKFKA WRQGRTGYPL VDAGMRELWA TGWMHNRIRV IVSSFAVKFL LLPWKWGMKY FWDTLLDADL ECDILGWQYI
401: SGSIPDGHEL DRLDNPALQG AKYDPEGEYI RQWLPELARL PTEWIHHPWD APLTVLKASG VELGTNYAKP IVDIDTAREL LAKAISRTRE AQIMIGAAPD
501: EIVADSFEAL GANTIKEPGL CPSVSSNDQQ VPSAVRYNGS KRVKPEEEEE RDMKKSRGFD ERELFSTAES SSSSSVFFVS QSCSLASEGK NLEGIQDSSD
601: QITTSLGKNG CK
101: NHLYDPVSLV RDHTVKEKLV ERGISVQSYN GDLLYEPWEI YCEKGKPFTS FNSYWKKCLD MSIESVMLPP PWRLMPITAA AEAIWACSIE ELGLENEAEK
201: PSNALLTRAW SPGWSNADKL LNEFIEKQLI DYAKNSKKVV GNSTSLLSPY LHFGEISVRH VFQCARMKQI IWARDKNSEG EESADLFLRG IGLREYSRYI
301: CFNFPFTHEQ SLLSHLRFFP WDADVDKFKA WRQGRTGYPL VDAGMRELWA TGWMHNRIRV IVSSFAVKFL LLPWKWGMKY FWDTLLDADL ECDILGWQYI
401: SGSIPDGHEL DRLDNPALQG AKYDPEGEYI RQWLPELARL PTEWIHHPWD APLTVLKASG VELGTNYAKP IVDIDTAREL LAKAISRTRE AQIMIGAAPD
501: EIVADSFEAL GANTIKEPGL CPSVSSNDQQ VPSAVRYNGS KRVKPEEEEE RDMKKSRGFD ERELFSTAES SSSSSVFFVS QSCSLASEGK NLEGIQDSSD
601: QITTSLGKNG CK
Arabidopsis Description
CRY2Cryptochrome-2 [Source:UniProtKB/Swiss-Prot;Acc:Q96524]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.