CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 1
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69286	Soybean	plastid	85.23	80.65
Solyc09g075180.2.1	Tomato	cytosol	72.27	70.35
PGSC0003DMT400081378	Potato	cytosol	71.82	69.76
VIT_07s0005g00590.t01	Wine grape	cytosol	68.86	66.74
AT2G47590.1	Thale cress	cytosol	67.5	66.44
GSMUA_AchrUn_...	Banana	cytosol	21.14	65.49
CDY71236	Canola	cytosol	67.5	65.27
CDY71211	Canola	cytosol	66.59	64.97
Bra004444.1-P	Field mustard	cytosol	66.82	64.62
GSMUA_Achr5P21430_001	Banana	cytosol	59.32	57.24
TraesCS7D01G334900.2	Wheat	plastid	57.27	56.5
TraesCS7A01G344600.1	Wheat	plastid	56.82	55.93
Zm00001d029105_P001	Maize	plastid	55.68	54.93
Os03t0343400-01	Rice	cytosol, nucleus, peroxisome, plastid	57.05	54.68
EER94877	Sorghum	cytosol, plastid	55.45	54.59
TraesCS7B01G238500.1	Wheat	cytosol, plastid	55.0	53.9
Zm00001d047501_P001	Maize	plastid	54.32	53.59
GSMUA_AchrUn_...	Banana	plastid	37.5	50.77
HORVU7Hr1G080580.2	Barley	plastid	54.77	50.0
CDX80119	Canola	endoplasmic reticulum	52.5	42.23
KRH61917	Soybean	plastid	31.82	23.97
KRH44412	Soybean	mitochondrion, plastid	16.82	13.14
KRH34384	Soybean	cytosol	18.41	12.62
KRG92422	Soybean	cytosol	17.95	12.46
KRH69122	Soybean	cytosol	15.91	11.67
KRH18908	Soybean	cytosol	15.0	9.69
KRH16735	Soybean	cytosol	15.0	9.69
KRH53063	Soybean	cytosol	15.0	9.68
KRH62344	Soybean	cytosol	14.77	9.54
KRH13218	Soybean	extracellular	0.0	0.0

Protein Annotations

Gene3D:1.25.40.80	EntrezGene:100777029	Gene3D:3.40.50.620	MapMan:35.1	EMBL:ACUP02006088	ncoils:Coil
InterPro:Crypto/Photolyase_FAD-like_sf	InterPro:Crypto/Photolyase_N_sf	InterPro:DNA_photolyase_N	EnsemblPlantsGene:GLYMA_10G017900	UniProt:I1L7U6	InterPro:IPR006050
InterPro:IPR014729	EnsemblPlants:KRH31864	ProteinID:KRH31864	ProteinID:KRH31864.1	PFAM:PF00875	PFscan:PS51645
PANTHER:PTHR11455	PANTHER:PTHR11455:SF2	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF48173	SUPFAM:SSF52425	UniParc:UPI000233CC52
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:1573257..1576241

Molecular Weight (calculated)

48045.9 Da

IEP (calculated)

7.528

GRAVY (calculated)

-0.346

Length

440 amino acids

Sequence
(BLAST)

001: MDLEAEKEHE AAFAVASLSL SLPTIFPFVQ PKNIPSTTLQ PTKLKVPTQA SSLTHLSLST TTPPPSKTSF KSTVSANPLH APLSLAPHRP RDPSNAAALR
101: RAAVVWFRND LRLLDNECLT AANNDSLSVL PVYCFDPSDY GKSASGFDKT GPYRAAFLID SVSDLRRSLQ ARGSDLVVRV GKPETVLVEL AKAVGADAVY
201: AHREVSHDEA KAEEKVEAAM KEENVEVKYF WGSTLYHVDD LPFQLEDMPS NYGGFRDRVQ KLEVRKTIEA LDHLKGMPSR GDFELGEIPS LMDLGLNPSA
301: TMSQDGKFGA NASMIGGETE ALQRLKKFAA ECAAQPNKGF KDGTQSIYGA NFSCKISPWL AMGCLSPRTM YEELKKTTSR AISASADKND GGNGSSRNGT
401: NWLMFELLWR DFFRFITKKY SSAKKQLEAA PVTACAGAYA

Best Arabidopsis Sequence Match ( AT2G47590.1 )
(BLAST)

001: MDSSNVEENL NPETKSAEEQ NPLAIFHSSL PIASLSLTLF PSSTQFLKLF AHHPNKVKIP TQASSLTHLS LSSVSPFPSS RISFKSTIAA NPLQSPLSIV
101: PRRPVDPSSA AALRRAAVVW FRNDLRVHDN ECLNSANDEC VSVLPVYCFD PRDYGKSSSG FDKTGPFRAQ FLIESVSELR KNLQARGSNL VVRVGKPEAV
201: LVELAKEIGA DAVYAHREVS HDEVKAEGKI ETAMKEEGVE VKYFWGSTLY HLDDLPFKIE DLPSNYGAFK DKVQKLEIRK TIAALDQLKS LPSRGDVELG
301: DIPSLLDLGI SPTPRTSQEG KPTMVGGETE ALTRLKSFAA DCQARLSKGN QKGGNNSVFG ANFSCKISPW LAMGSISPRS MFDELKKTIS ASTTSTTPRN
401: GPGDTGLNWL MYELLWRDFF RFITKKYSSA KTQVEAGPAT ACTGAFA

Arabidopsis Description

PHR2At2g47590 [Source:UniProtKB/TrEMBL;Acc:Q058P5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.